Yersinia frederiksenii: AW19_3887
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Entry
AW19_3887 CDS
T03606
Symbol
ccmA
Name
(GenBank) heme ABC exporter, ATP-binding protein CcmA
KO
K10558
AI-2 transport system ATP-binding protein
Organism
yfr
Yersinia frederiksenii
Pathway
yfr02010
ABC transporters
yfr02024
Quorum sensing
Brite
KEGG Orthology (KO) [BR:
yfr00001
]
09130 Environmental Information Processing
09131 Membrane transport
02010 ABC transporters
AW19_3887 (ccmA)
09140 Cellular Processes
09145 Cellular community - prokaryotes
02024 Quorum sensing
AW19_3887 (ccmA)
09180 Brite Hierarchies
09183 Protein families: signaling and cellular processes
02000 Transporters [BR:
yfr02000
]
AW19_3887 (ccmA)
Transporters [BR:
yfr02000
]
ABC transporters, prokaryotic type
Saccharide, polyol, and lipid transporters
AI-2 transporter
AW19_3887 (ccmA)
BRITE hierarchy
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Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
ABC_tran
AAA_21
SMC_N
RsgA_GTPase
MukB
AAA_29
AAA_22
AAA_23
AAA_30
Motif
Other DBs
NCBI-ProteinID:
AJI88702
LinkDB
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Position
complement(4194831..4196408)
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AA seq
525 aa
AA seq
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MPQINPSPLLQVRGISKQFSGVVVLKSIDFTLLPGQVHALLGGNGAGKSTLMKIIAGVLP
PDSGTIEIDGQLCSNLTPAKAHQLGIYLVPQEPMLFANLSVQENILFRLPKHQADKKKMA
QLLHSLGCHLDLSVSAGSLDVADQQLVEIMRGLMRDSHILILDEPTASLTPAETHRLFSQ
IKMLLQQGVGVVFISHKLPEIRQLADWVSVMRDGGMALSGATADFSTEAIIQAMTPQAKN
SELTDTQKLWLELPGNRRSQARAQSNQPVIQVSDLSGEGFAHISFEVRAGEILGLAGVVG
AGRTELAETLYGLRHASSGRVMLEELDITAMKTVNRLATGLVYLPEDRQASGLYLDAPLS
WNVCSLTQGNQGIWTHPAQEAAILERYRRALNIKFSHLEQPVRTLSGGNQQKLLIAKCLE
ANPLLLIIDEPTRGVDVSARSDIYQLIRSIASQHVAIIFISSDLEEVVQMADRVLVMHQG
EISGALEGSAMNVDTIMHLSFGEQAAFGEHQTDAHQSAENEGVSC
NT seq
1578 nt
NT seq
+upstream
nt +downstream
nt
atgccacagattaatccgtcccccctgctccaggttcgtggtatcagcaagcagttttcc
ggcgtcgtggtattgaaaagtatcgattttactctgctaccgggtcaggttcatgccctg
ctcggcggaaatggcgcggggaaatcgacactgatgaagatcatcgccggtgtgctgcct
cccgacagcggcactattgaaatagatgggcaactttgttccaacctcactccagccaag
gcccaccagctcggtatttatctggtgccacaggaacccatgctgttcgctaatttgtcg
gttcaggaaaacattctgttccgcttgccgaaacatcaggctgataaaaagaaaatggcg
cagttgctgcacagtttgggctgccatttagatttgtcggtcagtgccggttcgctggat
gtggctgaccagcagttagtcgagatcatgcgcggcctgatgcgcgactcgcatattttg
attcttgatgaacccaccgcctcgctaacacccgcggaaactcaccgtttatttagccaa
atcaaaatgttattgcagcaaggggtcggggtggtgtttatctcccacaaactgccggaa
attcgccaattagcagattgggtcagtgtgatgcgcgatggcgggatggccctgagtggc
gcgaccgctgatttctccaccgaggccattattcaggcgatgactccgcaagctaaaaac
agtgaattaaccgatacccagaagttatggctcgagctgcccggtaaccgccgctcgcaa
gcacgggcgcaatccaatcagccggtgatacaagtgagcgacttgagcggcgagggcttt
gcccatatttcttttgaggtgcgcgccggtgaaattctcgggctggcgggggtagtcggc
gcgggcagaaccgagctggccgaaacgctctatggcttacggcacgccagcagtggccgc
gttatgttggaagagctagacatcaccgccatgaaaaccgtcaatcggctggcaaccggc
ctggtttatctgccagaagaccggcaggcctccggcctctatctggatgccccgctgagc
tggaatgtctgttcgctcactcagggcaaccaagggatatggactcatccggcgcaggaa
gccgctattttggagcgctatcgccgcgcgctaaacatcaaatttagtcacctcgaacag
ccggttcggacgctatccggtggtaaccaacaaaagctgctgattgctaaatgtctggaa
gccaacccgctgctactgattattgatgaaccgacccgtggtgtggatgtgtcggcccgc
agtgatatttatcaattgatccgcagcattgcctcgcagcatgtggcgatcatttttatc
tcatcggatctggaagaagtggtgcaaatggcggatcgcgtgttggtcatgcaccagggg
gaaatcagtggcgcgctggagggcagtgcaatgaatgtcgacaccattatgcacttatct
tttggtgaacaggccgcttttggtgaacatcagaccgatgcccatcagtctgctgaaaat
gagggcgtatcatgttga
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