Yersinia frederiksenii: AW19_3935
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Entry
AW19_3935 CDS
T03606
Symbol
slt
Name
(GenBank) soluble lytic murein transglycosylase
KO
K08309
peptidoglycan lytic transglycosylase [EC:
4.2.2.29
]
Organism
yfr
Yersinia frederiksenii
Brite
KEGG Orthology (KO) [BR:
yfr00001
]
09180 Brite Hierarchies
09181 Protein families: metabolism
01011 Peptidoglycan biosynthesis and degradation proteins [BR:
yfr01011
]
AW19_3935 (slt)
Enzymes [BR:
yfr01000
]
4. Lyases
4.2 Carbon-oxygen lyases
4.2.2 Acting on polysaccharides
4.2.2.29 peptidoglycan lytic transglycosylase
AW19_3935 (slt)
Peptidoglycan biosynthesis and degradation proteins [BR:
yfr01011
]
Peptidoglycan biosynthesis and degradation
Lytic transglycosylase
AW19_3935 (slt)
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Gene cluster
GFIT
Motif
Pfam:
SLT
SLT_L
Cucumo_coat
SLT_4
Motif
Other DBs
NCBI-ProteinID:
AJI88112
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Position
4258513..4260432
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AA seq
639 aa
AA seq
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MDKWRYLAIGVCLVTTSGVAFADSIDAQRQRYQQVKLAWDSNQMDTVAQLMPTLREYPLY
PYLEYRQLTQDLSQLSAAQVTDFLTRNPTLPPASSLSSRFVNELARREDWRGLLAFSPQA
PKPAAARCNYYYAKWATGEQQVAWDGASEIWLNGQTLPGSCDKLFSVWQQAGHQTPLATL
ARMKLALKEGNASLVSYLLKQLPADYQTMGTALAKLQSDPASVESFARTVGPTDFTRSAT
IIAFTRLARQDVENARAMIPTLARLQKMSDSEKLELEEAVAWRLMGNDANYEQAKWRDQV
TLRSHSTPLLERRIRMSLGTGDRQGLAAWMARLPAEAQNKDEWRYWRATLLLEQGKKAEG
EAILRSLMQERGFYPMVAAQKLGVPYPINVEVATKPDASLAQRPEIARVRELMYWNMDNL
ARNEWSYLVASRSKPEQEALARYAFDQKWADLSVQATIVAKLWDHLEERFPLAWPKEFRQ
ATEGKGITPSYAMAIARQESAWNPKAQSPVGAAGLMQVMPRTAEHTVKLNNIPGYVNSSQ
LLDPVTNIEIGTSYLEEVYQQFGRNRILSSAAYNAGPSRVNTWLGNSSGQVDAVAFIESI
PFSETRGYVKNVLAYDAFYRHFMNRPAKVLSDAEWQRRY
NT seq
1920 nt
NT seq
+upstream
nt +downstream
nt
atggacaagtggcgatatctggcgattggcgtgtgtctggtgacgacctcaggagtggca
tttgccgactccattgatgcccaacggcaacgctatcagcaagttaaactggcttgggac
agcaatcagatggataccgtggcgcaactgatgcccacattgcgtgaatatccgctgtat
ccgtatctggaataccgccagttaacgcaagatttaagccaattgagtgcggcgcaagtg
accgattttctgactcggaaccccacattgccgccagcaagttcgctatcatcccgtttt
gttaacgagctggcgcgtcgtgaggattggcgcgggttattggcgttcagtccacaagcc
cctaaaccggcggcagctcgctgtaattattactatgccaaatgggccactggcgagcag
caagtcgcctgggatggtgccagcgagatttggctcaacggccagacgctaccgggtagc
tgcgataaattattcagtgtctggcaacaagccgggcatcaaaccccattggcaacattg
gcgcgtatgaagctggcgctgaaagaaggtaatgccagtttggtgagttacttactcaag
caactgccagccgattatcagaccatgggcacggcactggcaaaattgcaaagtgacccg
gccagtgtcgaaagttttgctcgaactgtcgggccgacagattttacccgctcagccact
atcattgcctttacccggctggcacggcaggacgtggaaaatgcgcgtgcgatgatccca
acgctggcgcggctgcaaaaaatgagtgacagcgagaagctggaactggaagaagcagtg
gcctggcgtctaatgggcaatgatgcgaattacgagcaagccaaatggcgtgatcaagtc
actttgcgtagccattccaccccgttgctggagcgccgcatccgtatgtcgctgggcacc
ggcgatcgccaaggattagcggcctggatggcccgtttaccggcagaggcacaaaataaa
gatgagtggcgctactggcgtgccacattgttgctggagcagggtaagaaagccgagggc
gaagccattctgcgtagcctgatgcaggagcgcggtttctatccgatggtcgccgcgcaa
aaactgggggtgccttacccgattaatgttgaagtggccaccaaacctgatgcttcactg
gcgcagcggcctgaaattgcccgggtgcgcgagttaatgtattggaatatggacaatttg
gcccgcaatgagtggagctatttggtcgccagccgcagcaaaccggagcaggaagcactg
gcgcgctatgcatttgaccaaaaatgggctgacttgagtgttcaggcgaccattgtggcc
aaattatgggatcatctggaagagcgcttcccactggcttggccaaaagaattccgtcag
gcgactgaaggcaaaggaataactccaagttatgcaatggcaatagctcgtcaggaaagt
gcctggaacccgaaagcacaatcgcccgtcggggcggcaggtctgatgcaggtgatgccg
cggactgcggaacacacggtcaaactgaataacatccccggttatgtgaacagcagccag
ttgctcgaccctgtcactaacattgagattggcaccagctatctggaagaggtttatcag
caatttgggcgcaatcggattttatccagtgcagcctataacgccggcccatcgcgggtg
aatacctggttgggaaatagcagtggacaggtggatgccgtggcatttatcgaaagcatt
ccgttctcagaaacgcgcggctatgtaaaaaacgtcttggcgtatgatgctttttatcgt
cactttatgaatcgcccggctaaggtgctgagtgatgccgagtggcagcggcgctactga
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