Yersinia frederiksenii: AW19_3997
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Entry
AW19_3997 CDS
T03606
Name
(GenBank) AMP-binding enzyme family protein
KO
K01897
long-chain-fatty-acid---CoA ligase [EC:
6.2.1.3
]
Organism
yfr
Yersinia frederiksenii
Pathway
yfr00061
Fatty acid biosynthesis
yfr00071
Fatty acid degradation
yfr01100
Metabolic pathways
yfr01212
Fatty acid metabolism
yfr02024
Quorum sensing
yfr04146
Peroxisome
Module
yfr_M00086
beta-Oxidation, acyl-CoA synthesis
Brite
KEGG Orthology (KO) [BR:
yfr00001
]
09100 Metabolism
09103 Lipid metabolism
00061 Fatty acid biosynthesis
AW19_3997
00071 Fatty acid degradation
AW19_3997
09140 Cellular Processes
09141 Transport and catabolism
04146 Peroxisome
AW19_3997
09145 Cellular community - prokaryotes
02024 Quorum sensing
AW19_3997
09180 Brite Hierarchies
09181 Protein families: metabolism
01004 Lipid biosynthesis proteins [BR:
yfr01004
]
AW19_3997
09183 Protein families: signaling and cellular processes
04147 Exosome [BR:
yfr04147
]
AW19_3997
Enzymes [BR:
yfr01000
]
6. Ligases
6.2 Forming carbon-sulfur bonds
6.2.1 Acid-thiol ligases
6.2.1.3 long-chain-fatty-acid---CoA ligase
AW19_3997
Lipid biosynthesis proteins [BR:
yfr01004
]
Acyl-CoA ligase
Long/very long chain acyl-CoA ligase
AW19_3997
Exosome [BR:
yfr04147
]
Exosomal proteins
Exosomal proteins of breast milk
AW19_3997
Exosomal proteins of breast cancer cells
AW19_3997
BRITE hierarchy
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
AMP-binding
AMP-binding_C_3
Motif
Other DBs
NCBI-ProteinID:
AJI87013
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All DBs
Position
4335759..4337558
Genome browser
AA seq
599 aa
AA seq
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MTQLLDKYHLVRRLRQQISQRADKVAFREWSPEGENQLTWRQIDTHVTRISAALLSLGVA
IQERVGIFANNSMAWSLADLAILQIRGVSVPLYATNTTAQAVYVMNDADVRILFVGGQAQ
FDVAITLKPLCPQLSQIVVLDPHVDLRGCEYAQHLADFEQQPDAVLQHLLTARIDGCDLS
DLFTLIYTSGTTGEPKGVMLEYRNMAAQLYLHDQRLTLTPEDTSLSFLPLSHVFERAWSF
YVMHTGAQNVYISDTNWVRAAMQAVKPTVMCAVPRFYEKVFSAINDKVASAKWHRRMLFN
WAVRCGERKFQALQSGQTSSWLSEQMFKLADRLVLSKLRDLLGGKVRFLPAAGARLDDNI
ILFFQAIGVNIKYGYGMTETCATVSCWEDKDFRFGSIGKPLPGIEVRLGAENEIQVRGPV
VMRGYFNKPQETAESLTEDGWLKTGDAGALDAQGNLFITERLKDLMKTSGGKYIAPQMIE
GTLNQDRFIEQVAIIADTRKFVSALIVPCFESLEEYAHSINLKYHDRLELLRHSHIVSLF
EQRLKDMQKELAKFEQVKRFTLLPQAFTMETGELTPTMKLRRKIILQNYQNEIDSMYRD
NT seq
1800 nt
NT seq
+upstream
nt +downstream
nt
atgactcaactattagataaatatcaccttgtgcgccggttgcgccaacaaataagccag
agagctgacaaggtcgcgttccgtgaatggtcgccagaaggcgaaaatcaactgacctgg
cggcagattgatactcatgtgacgcgaatttcagcggctttgttgtctttgggtgttgca
atccaagagcgtgttgggatttttgctaataacagcatggcttggtcattagccgattta
gctattttacaaattcgcggtgtgagcgtgccgttgtacgccaccaatacaaccgctcaa
gctgtttatgtaatgaatgatgctgatgtgcgcattttatttgtcggtggacaagcgcag
tttgatgtcgcaattacactcaagccgctatgcccacaattgagccaaattgtggtatta
gacccccatgtagatttacgtggctgtgaatatgcccaacatttagctgattttgaacag
cagccagatgcggttctgcaacatttattaaccgcacgtatagatggttgcgatttaagt
gatttattcacattgatttatacttcgggcacgaccggcgagccgaaaggggtgatgctg
gagtaccggaatatggccgctcagctctatttgcatgaccagcgcttgaccctgacacct
gaagatacctctcttagtttcctgccgctgtctcatgtgtttgagcgggcctggagtttc
tatgtcatgcataccggcgcgcaaaatgtgtatatcagtgacaccaattgggtgcgagcc
gcgatgcaggcagtaaaaccgacggttatgtgtgcggttccgcgcttctacgaaaaagtg
ttcagcgctataaatgataaagttgcctcggcaaaatggcatcgccggatgttatttaac
tgggcggttcggtgcggcgagcgcaaattccaagctttgcaaagtgggcaaacctcctcg
tggctctcagagcagatgtttaagctggcggatcgtctggtattgagtaaattgcgcgac
ctgctgggggggaaagtgcgtttcttaccggccgccggtgcacggctggatgacaatatt
attctgtttttccaggccattggcgtcaatatcaagtacggctatggtatgacagaaacc
tgcgccacggtttcttgttgggaggataaagacttccggtttggttctatcggtaagcca
ttaccggggatcgaagtgcgtttgggcgctgaaaatgaaattcaagtgcgcggcccggtt
gtcatgcgcggctatttcaataaacctcaagagaccgcagaatctctcactgaggatggt
tggctcaaaaccggtgatgccggtgcgctagatgctcaggggaatttattcatcaccgag
cggctgaaagatttgatgaaaacatcgggcggaaaatacattgcgccgcagatgattgag
ggcactctcaatcaggatcgctttatcgagcaagttgcgattattgccgatacccgcaaa
tttgtttcggcgctgattgtcccgtgcttcgaatcgctggaagaatatgcgcattcgata
aacctgaaatatcacgaccggctcgaactgttacgtcatagtcatattgtcagtttgttc
gagcaacggctgaaagatatgcaaaaagagctggcaaagttcgagcaagttaagcgcttt
actctgttgccgcaggctttcacgatggaaacaggtgaattgacacctactatgaaatta
cggcgtaaaatcattctccagaactatcagaatgaaattgactccatgtaccgcgattaa
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