Yersinia frederiksenii: AW19_837
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Entry
AW19_837 CDS
T03606
Symbol
lacZ
Name
(GenBank) beta-galactosidase
KO
K01190
beta-galactosidase [EC:
3.2.1.23
]
Organism
yfr
Yersinia frederiksenii
Pathway
yfr00052
Galactose metabolism
yfr00511
Other glycan degradation
yfr00600
Sphingolipid metabolism
yfr01100
Metabolic pathways
Brite
KEGG Orthology (KO) [BR:
yfr00001
]
09100 Metabolism
09101 Carbohydrate metabolism
00052 Galactose metabolism
AW19_837 (lacZ)
09103 Lipid metabolism
00600 Sphingolipid metabolism
AW19_837 (lacZ)
09107 Glycan biosynthesis and metabolism
00511 Other glycan degradation
AW19_837 (lacZ)
Enzymes [BR:
yfr01000
]
3. Hydrolases
3.2 Glycosylases
3.2.1 Glycosidases, i.e. enzymes that hydrolyse O- and S-glycosyl compounds
3.2.1.23 beta-galactosidase
AW19_837 (lacZ)
BRITE hierarchy
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
Glyco_hydro_2_C
Glyco_hydro_2_N
Bgal_small_N
LacZ_4
Glyco_hydro_2
Glyco_hydro_2_N2
Motif
Other DBs
NCBI-ProteinID:
AJI89035
LinkDB
All DBs
Position
complement(892183..895335)
Genome browser
AA seq
1050 aa
AA seq
DB search
MTVQQEVKQRVKPALSQILSRRDWENPQITQYNRLEAHPPFYSWRNISAAQDDNDSPQRQ
LLNGQWTFSYFTRPESVPDEWAEQDFPGSASIPVPSNWQLHGYDTPIYTNVRYPIPVDPP
RVPQDNPTGCYSYNFTLDPDWLSSGQTRIIFDGVSSAFYLWCNGQWVGYSQDSRLPAEFD
LTPYLQANNNRIAVLVLRWSDGSYLEDQDMWRMSGIFRDVSLLHKPDIHLRDVHITTHLS
PEFSSAHLDVMAAVNIPLIDINNTQVIEAYQIRVQLWLADTLVTSLQQPLGTQAIDERGN
YADRTLLNLRVEQPLLWSAEQPTLYRAVISLLDNQQKLIEAEAYDVGFRQVAIHQGLLKI
NGKAVLIRGVNRHEHHPQTGQAIDEESMLQDIILMKQHNFNAVRCSHYPNHPLWYRLCDR
YGLYVVDEANIETHGMQPMGRLADDPQWFSAFSERVTRMVQRDRNHPCIIIWSLGNESGH
GASHDALYRWIKTNDPTRPVQYEGGGANTQATDIICPMYARVDEDQPFPAVPKWAIKKWI
GLPNESRPLILCEYAHAMGNSFGGFSRYWQAFRQYPRLQGGFIWDWVDQSLSRNDENGQS
YWAYGGDFGDSPNDRQFCMNGLVFPDRTPHPSLYEAQCAQQFFQFGLLSTTPLVVSITSE
YLFKNSDNEHLYWRIELKGESVLEGNLPLDLSPESTQYLTLADQLPTISEPGDLWLNVEV
RQVKETSWSPKHHRSAWRQWRLPHSLSVPQNSLASLAESDCLQLHQDAEYITVIHQQQRW
LFSCQTGLMEQWWVDGKNRLLTPLRDQFVRAPLDNDIGISEATQIDPNAWVERWKKAGMY
QLEQRCLSLQADILSQTIQISAEYIYEFAQEQLLHTHWLYRFDKQGRMTIDVRVQVATLL
PPPARIGMCCQLSDISENVSWLGLGPHENYPDRQLSAQYGHWSQPLEQMHTPYIFPSENG
LRCKTNALNYGNWQLTGQFHFGISRYSTQQLMMTSHQYLLKPEPGTWLNIDGFHMGVGGD
DSWSPSVHIDNLLTCETYQYQVCWQYKSEI
NT seq
3153 nt
NT seq
+upstream
nt +downstream
nt
atgacggtacagcaagaagttaaacagcgggttaaaccagccttatcacagattttatct
cgccgagattgggaaaacccacaaataacacagtacaaccgccttgaagcgcaccctcca
ttttacagttggagaaatatcagtgccgctcaagatgataatgattccccacagcggcaa
ttactgaatgggcagtggacatttagttattttacgcggcctgaatcagtacccgatgaa
tgggctgagcaagacttcccaggatcagcgtcaataccagtcccttcaaattggcaactc
catggttacgacaccccgatttataccaatgtgcgatacccaattcccgttgacccaccg
cgagtgccacaggacaacccgacaggctgttattcttataattttaccttagatcccgat
tggctctcgtcagggcaaacccgcattatttttgatggcgtgagttccgcattctatctg
tggtgtaacggccagtgggttgggtattcccaagacagtcgcctgcccgccgaattcgat
ctcactccttatttgcaagcaaacaataaccgcatcgccgttcttgtattgcgttggagt
gatggtagctatctggaagatcaggatatgtggcgcatgagcgggatttttcgtgatgtc
agcctactacacaagcctgatattcatttgcgggatgttcatatcacaacgcatttatcg
cccgaattcagctccgcccatttagatgtgatggcggcagttaatattccattgattgat
atcaataacacgcaagtgatcgaagcctatcaaatccgggtgcaactttggttggcggat
acgttagttaccagtttgcaacaacctctaggtactcaagcaattgatgaaagagggaat
tatgctgatcgcactctcctaaacctacgggtagagcaacccttattatggagtgctgaa
caacctacgctctatcgagccgtcatctcgctacttgataaccagcaaaaacttatcgaa
gcggaagcttatgatgtcggtttccgccaagtggccattcatcaagggctactcaagatt
aatggtaaagcggtactaattcgtggggtgaatcgccatgagcatcacccccaaacaggt
caagctatagatgaagaaagtatgctgcaagatatcattttaatgaaacagcataacttt
aatgccgtaaggtgttcacattaccccaatcacccactgtggtatcgcctgtgcgatcgc
tacggtttatatgttgtcgatgaagccaatatcgaaacacatggaatgcagcctatgggg
cggttggcagacgatccacagtggttttctgctttcagcgaacgagttacccggatggtt
cagcgcgaccgtaaccacccttgcattattatctggtcattgggcaatgaatcaggtcac
ggcgctagccacgatgcactttatcgctggataaaaaccaatgaccccactcgcccagta
caatatgaaggtggcggtgcaaatacccaagctactgatattatttgcccaatgtatgct
cgagtggatgaagaccaacctttcccagcagtacctaaatgggcgataaaaaaatggatt
ggtctaccaaacgaatctcgtccgttgattttgtgcgaatatgcccatgcaatgggcaac
agttttggtgggttttcccgctattggcaagcatttcgccaataccctcggctacagggg
gggtttatttgggattgggtagaccaaagcctcagtcgtaatgatgaaaatggtcagtct
tattgggcttatggtggtgactttggcgacagccccaatgaccgacaattctgtatgaat
ggattagtttttcctgaccgtaccccccacccaagtctgtatgaagcacaatgcgcgcag
caatttttccaattcgggttgcttagcacaacaccgttggtagtcagcattaccagtgaa
tatctgttcaaaaacagcgataacgagcacctgtattggcgtatcgagttaaagggagaa
tcagttttggagggtaatctcccactagatttatcgcctgaaagcacacaataccttaca
ttggcagatcaattaccgaccatcagtgagccaggtgatttatggctaaatgttgaagtc
aggcaagtaaaagagacttcttggtcaccaaagcatcatcgtagtgcatggcgtcaatgg
cgtttaccgcattcactctctgttccccaaaattccttagctagcttagctgagtctgat
tgcctccaactgcaccaagatgcggaatatattactgtgattcatcaacagcagcgctgg
ctatttagctgccaaaccggattgatggaacaatggtgggtcgatgggaaaaatagattg
ctcactccattgcgtgatcaatttgtccgcgcaccgctggataacgatattggtattagt
gaagcaacacaaattgatcctaatgcttgggttgagcgctggaaaaaagcaggaatgtat
caactggaacaacgttgtttatccttacaagcggatatcttgtctcagactatacaaatc
agcgctgaatatatctatgagtttgcccaagaacaattattacatactcattggttatat
cgctttgataaacaaggccgtatgaccattgatgtccgagttcaagttgccacattgctc
cccccaccggccagaatcggtatgtgttgccaattatctgatatttctgaaaatgttagt
tggttgggattaggaccacacgaaaactatcctgaccgccaactctcggcacaatatggt
cactggtcgcaaccccttgaacagatgcacaccccctacatattcccaagtgaaaatgga
ttacgttgcaaaactaatgcattgaattatggaaattggcaattaacggggcagttccat
tttggtatcagtcgttacagcacacagcaactcatgatgaccagccatcagtatttactt
aagccagaaccaggtacctggcttaatattgatggtttccatatgggcgttggtggtgat
gattcatggagccccagcgtccatatcgataacttactgacatgtgaaacttatcaatac
caggtctgctggcaatacaaaagtgagatataa
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