Yersinia hibernica CFS1934: D5F51_00250
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Entry
D5F51_00250 CDS
T05961
Name
(GenBank) DNA-directed RNA polymerase subunit omega
KO
K03060
DNA-directed RNA polymerase subunit omega [EC:
2.7.7.6
]
Organism
yhi
Yersinia hibernica CFS1934
Pathway
yhi03020
RNA polymerase
Brite
KEGG Orthology (KO) [BR:
yhi00001
]
09120 Genetic Information Processing
09121 Transcription
03020 RNA polymerase
D5F51_00250
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03021 Transcription machinery [BR:
yhi03021
]
D5F51_00250
03400 DNA repair and recombination proteins [BR:
yhi03400
]
D5F51_00250
Enzymes [BR:
yhi01000
]
2. Transferases
2.7 Transferring phosphorus-containing groups
2.7.7 Nucleotidyltransferases
2.7.7.6 DNA-directed RNA polymerase
D5F51_00250
Transcription machinery [BR:
yhi03021
]
Prokaryotic type
Bacterial type
RNA polymerase
Core subunits
D5F51_00250
DNA repair and recombination proteins [BR:
yhi03400
]
Prokaryotic type
SSBR (single strand breaks repair)
NER (nucleotide excision repair)
TCR (transcription coupled repair) factors
DNA-directed RNA polymerase complex (RNAP)
D5F51_00250
BRITE hierarchy
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
RNA_pol_Rpb6
AmiR_N
DUF1599
Motif
Other DBs
NCBI-ProteinID:
QAX77146
LinkDB
All DBs
Position
complement(58265..58540)
Genome browser
AA seq
91 aa
AA seq
DB search
MARVTVQDAVEKIGNRFDLVLVAARRARQIQSGGKDALVPEENDKVTVIALREIEEGLIT
NQILDVRERQEQQEQEAAEIQAVTAIAEGRR
NT seq
276 nt
NT seq
+upstream
nt +downstream
nt
atggcacgcgtaactgttcaagacgctgtagagaaaattggtaaccgttttgacctggtg
ttggtcgctgctcgtcgggcacgtcaaatccagtccggcggtaaagacgcactggttcca
gaagaaaacgataaagtgactgtgatcgcgctgcgcgaaatcgaagaaggcctgattact
aatcagattctcgatgtgcgtgaacgccaagaacagcaagagcaggaagccgcagagatt
caagcggtaaccgcgattgctgaaggtcgtcgttaa
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