Yersinia hibernica CFS1934: D5F51_00885
Help
Entry
D5F51_00885 CDS
T05961
Symbol
rhlB
Name
(GenBank) ATP-dependent RNA helicase RhlB
KO
K03732
ATP-dependent RNA helicase RhlB [EC:
5.6.2.7
]
Organism
yhi
Yersinia hibernica CFS1934
Pathway
yhi03018
RNA degradation
Brite
KEGG Orthology (KO) [BR:
yhi00001
]
09120 Genetic Information Processing
09123 Folding, sorting and degradation
03018 RNA degradation
D5F51_00885 (rhlB)
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03019 Messenger RNA biogenesis [BR:
yhi03019
]
D5F51_00885 (rhlB)
Enzymes [BR:
yhi01000
]
5. Isomerases
5.6 Isomerases altering macromolecular conformation
5.6.2 Enzymes altering nucleic acid conformation
5.6.2.7 DEAD-box RNA helicase
D5F51_00885 (rhlB)
Messenger RNA biogenesis [BR:
yhi03019
]
Prokaryotic type
Bacterial mRNA degradation factors
RNA degradosome components
Helicases
D5F51_00885 (rhlB)
BRITE hierarchy
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
DEAD
Helicase_C
ResIII
ERCC3_RAD25_C
AAA_22
CCDC138_C
Motif
Other DBs
NCBI-ProteinID:
QAX77254
LinkDB
All DBs
Position
complement(192850..194139)
Genome browser
AA seq
429 aa
AA seq
DB search
MSKTHLTEQKFSDFALHPLVIEALENKGFQYCTPIQALALPLTLSGRDVAGQAQTGTGKT
LAFLASTFHYLLSHPAPEGRQTNQPRALIMAPTRELAVQIHSDAESLSQITGLKLGLAYG
GDGYDKQLKVLESGVDILIGTTGRLIDYAKQNYINLGAIQVVVLDEADRMYDLGFIKDIR
WLFRRMPSVDQRLNMLFSATLSYRVRELAFEQMNNAEYVEVEPLQKTGHRIQEELFYPSN
EEKMRLLQTLIEEEWPDRCIIFANTKHRCEEIWGHLAADGHRVGLLTGDVAQKKRLRILE
DFTKGDLDILVATDVAARGLHIPLVTHVFNYDLPDDCEDYVHRIGRTGRAGESGHSISLA
CEEYALNLPAIEAYTGHSIPVSKYNSDALLTDLPAPKRLARPRTGNGPRRNSAPRRNSGA
PRNNRKRPS
NT seq
1290 nt
NT seq
+upstream
nt +downstream
nt
atgagcaaaacacacttgaccgaacagaagttttccgacttcgccctgcacccgctagtt
attgaagctcttgaaaacaaagggtttcagtattgtacgccgatccaggcgttagcattg
ccactcaccctctctgggcgtgatgtagcgggtcaggcgcaaacaggaaccggcaagacg
ctggcatttctagcgtctactttccattatttgctttctcacccggcaccagagggtcgc
cagactaatcaaccgcgcgcattgattatggcaccaacacgtgaattggcggtgcaaatt
cactccgatgcagaatcactttcccagataaccgggctgaaattaggcttggcttacggt
ggagatggctacgataaacagcttaaagtgctggagagtggcgttgatattctgatcggt
accacgggtcgtttaatcgattacgcaaaacaaaattacattaatctcggggcaattcag
gttgtggtcttagatgaagctgaccggatgtatgacctcggctttatcaaagatatccgc
tggctgttccgccgcatgccttccgttgatcagcgtttaaacatgctgttctctgccaca
ctctcgtaccgagtacgtgaattagcattcgaacaaatgaataacgccgaatatgttgaa
gtggaaccgttgcaaaaaaccggccaccgcattcaggaagagctgttctacccctcaaat
gaagaaaaaatgcgtctattgcagacgttaattgaagaagagtggccagaccgctgcatt
atttttgccaatactaaacatcgctgtgaagaaatctggggccacctggctgctgatggt
catcgtgttggcctgttgaccggtgatgtcgcgcagaaaaaacgcctgcgaattctggaa
gatttcaccaaaggtgatttggatattctggtcgccaccgatgtagccgcccgtggttta
catattccactggtaacccatgtcttcaactatgacctacccgatgattgtgaagactat
gttcaccgcattggccgtaccggtcgtgctggcgaaagtggtcattccatcagtttggcc
tgtgaagaatacgctttaaacttaccggctatcgaggcctacaccggtcatagcattccg
gtaagtaaatataatagcgatgcgctattaacagatttgccggcgccaaaacgtctggcc
cgtccccgcactgggaatggcccacgccgtaactctgccccacgccgtaatagtggtgca
ccgcggaataaccgtaagcgaccgagctga
DBGET
integrated database retrieval system
