Yersinia hibernica CFS1934: D5F51_01100
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Entry
D5F51_01100 CDS
T05961
Symbol
recQ
Name
(GenBank) ATP-dependent DNA helicase RecQ
KO
K03654
ATP-dependent DNA helicase RecQ [EC:
5.6.2.4
]
Organism
yhi
Yersinia hibernica CFS1934
Pathway
yhi03018
RNA degradation
Brite
KEGG Orthology (KO) [BR:
yhi00001
]
09120 Genetic Information Processing
09123 Folding, sorting and degradation
03018 RNA degradation
D5F51_01100 (recQ)
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03019 Messenger RNA biogenesis [BR:
yhi03019
]
D5F51_01100 (recQ)
03400 DNA repair and recombination proteins [BR:
yhi03400
]
D5F51_01100 (recQ)
Enzymes [BR:
yhi01000
]
5. Isomerases
5.6 Isomerases altering macromolecular conformation
5.6.2 Enzymes altering nucleic acid conformation
5.6.2.4 DNA 3'-5' helicase
D5F51_01100 (recQ)
Messenger RNA biogenesis [BR:
yhi03019
]
Prokaryotic type
Bacterial mRNA degradation factors
RNA degradosome components
Helicases
D5F51_01100 (recQ)
DNA repair and recombination proteins [BR:
yhi03400
]
Prokaryotic type
DSBR (double strand breaks repair)
NHEJ (non-homologous end-joining)
SHDIR (short-homology-dependent illegitimate recombination)
Supressor
D5F51_01100 (recQ)
BRITE hierarchy
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
RQC
DEAD
Helicase_C
HRDC
RecQ_Zn_bind
ResIII
Peptidase_S66
zf-CXXC
Helicase_Sgs1
Motif
Other DBs
NCBI-ProteinID:
QAX77290
UniProt:
A0ABX5QVC5
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All DBs
Position
234935..236767
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AA seq
610 aa
AA seq
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MSTAAVINRELLAEKVLRDTFGYQQFRPGQQEIINATLSGQDCLVVMPTGGGKSLCYQIP
ALVTDGLTLVVSPLISLMKDQVDQLLAYGVGAGCLNSSQTREQQLAVMDGCRSGQIKLLY
IAPERLVMESFLDQLHQWRPALLAVDEAHCISQWGHDFRPEYRALGQLKQHFPNLPVIAL
TATADEATRGDIVRLLNLDKPLIQVSSFDRPNIRYTLVEKFKPLDQLWRFVQDQRGKSGI
IYCNSRAKVEDTTARLQSRGLSVAAYHAGLDNERRAQVQEAFQRDDLQVVVATVAFGMGI
NKPNVRFVVHFDIPRTIESYYQETGRAGRDGLPAEAMLLYDPADMAWLRRCLEEKPAGAQ
QDIERHKLNAMGAFAQAQTCRRLVLLNYFGEGKQQSCGNCDICLDPPKRYDGLADAQKAL
SCVYRVGQRFGLGYIVEVLRGANNQRIRELGHDKLSVYGIGREQSHEHWVSVLRQLIHLG
LLSQNIALFSALQLTEAARPVLRAELPLQLAVPRIQSLKERSSANQKSYGGNYDRKLFAK
LRKLRKSIADEGNIPPYVVFNDATLLEMAEQMPITASELLSVNGVGQRKLERFGAPFMAM
IRDHVDNNDD
NT seq
1833 nt
NT seq
+upstream
nt +downstream
nt
gtgtcaaccgcagcagtgataaatcgggagttactggcagagaaggtattgcgcgatact
ttcggctaccagcaattccggcccggacaacaagaaattatcaatgccaccttatcaggg
caagactgtttggtcgtgatgccaacgggtgggggtaaatccttgtgttatcagattccg
gccctggtgacggatggcttaacactggtggtctcccccttaatctctctaatgaaagac
caagtcgaccaactgctggcctatggcgtgggggcggggtgcttgaactcgtcgcaaaca
cgcgagcagcaattggcggtgatggatgggtgtcgcagcggccagattaaactgctgtat
atcgccccagaacggctggtcatggagagctttcttgaccaactgcatcagtggcggcca
gcgctattggctgtggatgaggcgcattgcatctcccaatggggccatgatttccgcccg
gaatatcgagcccttggccagctaaagcaacattttcccaatttaccggtcattgcactg
accgccacggcggatgaagcgacgcgcggtgatatcgtgcgcttgctcaatctggacaag
cccttgattcaggtcagcagctttgaccgccccaatattcgctacaccttggtcgagaaa
ttcaaaccgcttgatcaactgtggcgttttgttcaagaccagcgcggcaagagtggcatt
atttactgcaatagccgggcaaaagtggaagacaccaccgcccgtttgcaaagccgtggc
ttgagtgtcgcggcctaccatgccgggctggacaatgagcggcgcgcacaggtgcaagaa
gcctttcagcgcgatgatttgcaagtggtggtcgccaccgtggcattcggcatggggatt
aacaaacccaacgtgcgctttgtggtgcactttgacattccgcgcactatcgagtcttac
tatcaagaaaccggccgtgctgggcgtgatggcttacccgcggaggccatgttgctgtat
gacccggccgatatggcgtggttgcgccgctgtctggaagagaagccggcaggcgcacag
caagatattgagcggcataaactcaatgcgatgggcgcttttgcacaagcgcaaacttgc
cgccgattggttttgctgaactattttggtgagggcaaacagcaatcttgtggtaactgc
gatatctgccttgatccgcccaagcgctacgatgggctggcggatgcacaaaaagcactg
tcgtgtgtgtatcgagtcgggcagcgctttggtctggggtatatcgtcgaggtactgcgt
ggggctaataatcagcgcattcgtgaattgggccatgacaagttatccgtgtatggcatt
ggtcgcgagcaaagccatgagcactgggtcagtgtgttgcgccaactgattcaccttgga
ttattgagtcaaaatattgccctgttttccgccttgcaattgacggaagcggcacgcccg
gtattgcgcgctgaattgccattgcagttggcggtgccgcgtattcagagcttgaaagag
cgcagcagcgccaatcaaaaatcctatggtggcaattacgatcgcaagttgttcgccaaa
ttacgcaagttgcgcaaatctattgctgatgagggcaatattccgccttatgtggtgttt
aacgatgccactttgctggagatggctgagcaaatgccgatcaccgccagcgaactattg
agtgtcaatggcgtggggcaacgtaaactggagcgctttggcgcaccgtttatggcgatg
atccgcgaccacgtagataataatgacgactaa
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