Yersinia hibernica CFS1934: D5F51_01425
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Entry
D5F51_01425 CDS
T05961
Symbol
fadB
Name
(GenBank) fatty acid oxidation complex subunit alpha FadB
KO
K01825
3-hydroxyacyl-CoA dehydrogenase / enoyl-CoA hydratase / 3-hydroxybutyryl-CoA epimerase / enoyl-CoA isomerase [EC:
1.1.1.35
4.2.1.17
5.1.2.3
5.3.3.8
]
Organism
yhi
Yersinia hibernica CFS1934
Pathway
yhi00071
Fatty acid degradation
yhi00280
Valine, leucine and isoleucine degradation
yhi00310
Lysine degradation
yhi00362
Benzoate degradation
yhi00380
Tryptophan metabolism
yhi00410
beta-Alanine metabolism
yhi00640
Propanoate metabolism
yhi00650
Butanoate metabolism
yhi00907
Pinene, camphor and geraniol degradation
yhi00930
Caprolactam degradation
yhi01100
Metabolic pathways
yhi01110
Biosynthesis of secondary metabolites
yhi01120
Microbial metabolism in diverse environments
yhi01200
Carbon metabolism
yhi01212
Fatty acid metabolism
Module
yhi_M00087
beta-Oxidation
Brite
KEGG Orthology (KO) [BR:
yhi00001
]
09100 Metabolism
09101 Carbohydrate metabolism
00640 Propanoate metabolism
D5F51_01425 (fadB)
00650 Butanoate metabolism
D5F51_01425 (fadB)
09103 Lipid metabolism
00071 Fatty acid degradation
D5F51_01425 (fadB)
09105 Amino acid metabolism
00280 Valine, leucine and isoleucine degradation
D5F51_01425 (fadB)
00310 Lysine degradation
D5F51_01425 (fadB)
00380 Tryptophan metabolism
D5F51_01425 (fadB)
09106 Metabolism of other amino acids
00410 beta-Alanine metabolism
D5F51_01425 (fadB)
09109 Metabolism of terpenoids and polyketides
00907 Pinene, camphor and geraniol degradation
D5F51_01425 (fadB)
09111 Xenobiotics biodegradation and metabolism
00362 Benzoate degradation
D5F51_01425 (fadB)
00930 Caprolactam degradation
D5F51_01425 (fadB)
Enzymes [BR:
yhi01000
]
1. Oxidoreductases
1.1 Acting on the CH-OH group of donors
1.1.1 With NAD+ or NADP+ as acceptor
1.1.1.35 3-hydroxyacyl-CoA dehydrogenase
D5F51_01425 (fadB)
4. Lyases
4.2 Carbon-oxygen lyases
4.2.1 Hydro-lyases
4.2.1.17 enoyl-CoA hydratase
D5F51_01425 (fadB)
5. Isomerases
5.1 Racemases and epimerases
5.1.2 Acting on hydroxy acids and derivatives
5.1.2.3 3-hydroxybutyryl-CoA epimerase
D5F51_01425 (fadB)
5.3 Intramolecular oxidoreductases
5.3.3 Transposing C=C bonds
5.3.3.8 Delta3-Delta2-enoyl-CoA isomerase
D5F51_01425 (fadB)
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SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
3HCDH_N
ECH_1
3HCDH
ECH_2
Motif
Other DBs
NCBI-ProteinID:
QAX77347
UniProt:
A0ABX5QVV5
LinkDB
All DBs
Position
complement(302132..304321)
Genome browser
AA seq
729 aa
AA seq
DB search
MLYQSETLKLHWLENGIAELVFDAPGSVNKLDTKTVANLGEALAVLEKQSELKGLLLRSA
KAAFIVGADITEFLSLFNEPPEKLHQWLVFANDIFNRLEDLPVPTIAAINGYALGGGCEC
ILATDFRVASPEARIGLPETKLGIMPGFGGSVRLPRLLGADSALEIIAAGKDIIAKDALK
VGLVDAVVAPEKLADAALVMLKQAIDEKLDWQAARRPKLEPLKLNPTEAAMCFTIAKGMV
MQVAGKHYPAPLTAVKTIEAAAKFGRAEALKLETNSFVPLAGSNEARALVGIFLNDQYVK
GQAKKLAKGVSAPKQAAVLGAGIMGGGIAYQSALKGVPVMMKDINDKSLTLGMNEAAKLL
NKQLERGKIDGLKMANILATIQPTLDYTGIERAQVIVEAVVENPKVKAAVLAEVEALIGE
ETVLASNTSTIPIDQLANSLKRPENFCGMHFFNPVHRMPLVEIIRGAKTSDKTIAAVVAY
ATQMGKTPIVVNDCPGFFVNRVLFPYLAGFGMLVRDGADFRQIDKVMEKQFGWPMGPAYL
LDVVGIDTAHHAQAVMAAGFPDRMSKDYRDAVDVMFDNQRFGQKNGQGFYRYTQDAKGKP
RKEHDEQVDVLLAQVSQPIQKFSDDDIIARTMIPMINEVVRCLEEGIIASPAEGDMALVY
GLGFPPFHGGVFRYLDTIGSANYVEMAQRYAHLGALYHIPAGLRAKAEHNESYYPVAAAL
LDVTTSQPA
NT seq
2190 nt
NT seq
+upstream
nt +downstream
nt
atgctctaccaaagcgaaacactaaagcttcactggttggaaaacggtattgccgagttg
gtgtttgatgcaccgggttcagttaataagctggataccaaaactgtagccaatctgggt
gaagccctagctgtgttggaaaaacaaagcgaactcaaagggttgctattgcgctccgcc
aaagcagcctttattgtcggtgccgatatcaccgagtttctgtccctgtttaacgagcca
ccagaaaaactgcaccaatggctggttttcgctaatgatattttcaatcgtctagaagat
ttaccggtgccaaccattgcggcaatcaatggctatgcgctgggtggcggatgtgaatgt
attctggcgaccgattttcgcgtggcctcccccgaagcccgtatcggcctaccggaaacc
aagctcggtatcatgccgggctttggcggctcggtgcggttaccgcgcttattaggtgct
gacagtgcactggaaattatcgccgcgggtaaagatattattgccaaagatgccttaaaa
gtggggttggttgatgccgttgtggcccctgaaaagctggccgatgctgctttagtcatg
ctgaagcaagccattgacgagaaactcgactggcaagcagcacgccgcccgaaattagag
ccactgaagctcaacccgaccgaagccgccatgtgctttacaattgccaaaggcatggtc
atgcaagtggccggtaaacactatccggctccgctgactgccgtcaaaaccattgaagcc
gcggcaaaatttggccgagccgaagcattgaagctggaaaccaatagttttgttccctta
gcaggctccaatgaagcacgagcattagtcggcattttcctcaatgatcaatatgttaaa
ggtcaagctaagaagctcgccaaaggtgtcagtgcgccaaaacaggccgcggtactgggc
gctgggattatgggcggcggtatcgcctatcaatcggcactgaaaggtgtgccggtcatg
atgaaagatatcaatgacaaatctctgacattggggatgaatgaagccgctaagctactg
aataaacagttggaacgcggcaaaatagatggtctgaaaatggcgaatatcctggcgacc
atccagccgacattagattacaccggcattgagcgcgcccaagtcatcgtggaagccgtg
gtggaaaatccaaaagtgaaagcggccgtcctggccgaggttgaagcactgattggcgag
gaaacggtgttagcctcgaatacctcgacaatcccaattgatcagctcgctaactccctc
aaacgcccagaaaatttctgtgggatgcacttcttcaacccggttcaccggatgccgctg
gttgagattattcgtggcgcgaaaacctcagataaaactatcgccgccgttgtagcatac
gccacacaaatgggtaaaacccccattgtggtgaatgattgcccgggtttctttgttaac
cgtgtcttattcccgtatctggctggattcggcatgttggtcagagacggcgcggacttc
cgccagattgataaagtgatggagaagcaatttggctggccaatgggccctgcttatcta
ttagatgtggtcggcattgataccgcgcaccatgcacaagccgtgatggctgctggtttc
cctgaccgcatgagtaaagattatcgcgatgctgttgacgtgatgtttgataatcaacga
tttggtcaaaagaatggccaaggcttctaccgctacacccaagatgccaagggcaaaccg
cgtaaagagcacgatgaacaagtcgatgtgttactggcgcaagtcagtcaacccattcag
aagtttagcgatgatgacattattgcccgcaccatgatcccgatgatcaatgaagtggtg
cgctgcctggaagagggcattatcgccagcccagcggagggcgatatggcgctagtctat
ggccttggcttcccaccattccacggcggtgttttccgttaccttgacaccatcggcagt
gcaaattatgtcgaaatggcccagcgctatgcccatcttggtgcgctctatcacatcccg
gccgggctgagagccaaagctgaacataacgaaagctattatcctgtggcagcagcgctg
cttgatgttactaccagtcaaccggcatga
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