Yersinia hibernica CFS1934: D5F51_02085
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Entry
D5F51_02085 CDS
T05961
Symbol
mscM
Name
(GenBank) miniconductance mechanosensitive channel MscM
KO
K22051
miniconductance mechanosensitive channel
Organism
yhi
Yersinia hibernica CFS1934
Brite
KEGG Orthology (KO) [BR:
yhi00001
]
09180 Brite Hierarchies
09183 Protein families: signaling and cellular processes
02000 Transporters [BR:
yhi02000
]
D5F51_02085 (mscM)
Transporters [BR:
yhi02000
]
Other transporters
Pores ion channels [TC:
1
]
D5F51_02085 (mscM)
BRITE hierarchy
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Ortholog
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Gene cluster
GFIT
Motif
Pfam:
MscS_TM
MscS_porin
MS_channel_2nd
MS_channel_3rd
MS_channel_1st
Motif
Other DBs
NCBI-ProteinID:
QAX77455
LinkDB
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Position
complement(433763..437122)
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AA seq
1119 aa
AA seq
DB search
MLRNPYVRLIISWFSAILLSAVMLLSLPLYAATQPNEDQLRQELKQAEANKGMINQAEIV
QALQGALSWLADAKESDIRAQQYQKAIDDFPKLTRELRQQLAQEGDKPLPVPNNMSTSEL
EQQVLQISSQLLELNRLSQQEQDRAREISESLNQLPQQQSEARRILTEINTRLQAQNSPT
TPVAQAQLALLQAEAVARKAKVNELELSQLSANNRQELSRLRAELYKKRQERVDAQLQTL
RNNLNNQRQQAAEQALERTELLAEQGGDLPESITQQLQINRDLSQALNQQAQRIDLISSQ
QRQAVTQTQQVRQALSTIREQAQWLGVSTALGEALRAQVARLPDVPKSQQLDRDMAQLRV
QRLQYEDMLEKLQQQNVKLTQDDGTPLTTEQQRILDAQWRTQRELLNSLLSGYDTQILEL
TKLKVANSQLVDALSEVREATHRYLFWVADVSPISLSYPINVAQDLTRLLTLDTLSQLSG
AFVMMVTTQDTLLPIIGALLFVGFSLSSRRHYHAFLERASSRVGKVTQDHFSLTLRTVFW
SILMALPLPVLWAAVGYGLQSAWSYSMAIAIGNAVTATVPVLWVFMISAAFAHPHGLFIT
HFRWSPAQVGRAMRFYRMSVWLIIPLMMALITFENYNDREFAGTLGRLCFILLCIALSLV
TNSLKRAGIPLYLDKKGSGENIVNAALWGLLLSAPLIAALASALGYLTTSQALLARLETS
VAIWFFLLVVYHIIRRWMLIQRRRIAFDRAKQRRADILAQRARGEDDTPHNNSTEGSIDV
EEPVIDLDVISAQSLRLVRSILTMVALVSVIVLWSEIHSAFGFLENIRLWDVSSTINGVE
SVQAITMGSLLIAILVMIVTAQLVRNLPALLELALLQHLDLTPGTGYAISTITKYLLILF
GGLLGFSMLGIEWAKFQWLVAALGLGLGFGLQEIFANFVSGLIILFEKPIRIGDTVTIRD
LTGSVTKINTRATTISDWDRKEIIVPNKAFITEQFINWSLSDSITRVVLTVPAPAETSSE
EVTEVLLTAARRCTLVLDNPPPEVYLVDLQQGIQIFELRIYAAEMGHRMPLRHEIHQLIL
AGYREHGITLPFPPFQARLETLGRGRVVSSSRPRAPGSL
NT seq
3360 nt
NT seq
+upstream
nt +downstream
nt
atgttaaggaacccatacgtgcgcctaatcatttcatggttttctgcaatattactgtca
gcggtaatgttgttatccctgcctctttatgccgcaactcagccaaatgaagaccagctc
agacaagagctgaaacaggctgaagctaataaggggatgataaatcaggcagaaattgtg
caagcgctgcaaggggcccttagctggctggccgatgcaaaagagtctgatattcgcgcc
cagcagtaccaaaaagccattgatgactttcccaagctgactcgagagttacgccaacaa
ctggcacaggagggggataaacccctgcctgtgccaaacaatatgtccacgtccgaactg
gaacagcaagtgctgcaaatcagcagccaattgctagagttgaaccgcctatcgcagcag
gaacaagaccgcgcgcgggaaatcagtgagtcactcaatcagctcccgcagcaacaatca
gaagcccggcgcattctgaccgaaatcaatacgcgacttcaggcacaaaatagccccacg
acccctgtagcacaggcgcaattggcattattgcaggctgaagccgtcgcccgcaaagct
aaggtcaacgagttggagctttcccagctctccgccaataatcgccaagaactgtcacgg
ctgcgggccgagctatacaaaaaacgccaggaacgggtcgatgcccagctccagacttta
cgtaacaatctgaataatcagcgtcaacaagccgcagaacaagcacttgagcgcacagaa
ctactggcggaacaaggcggtgatttacccgagtcgattacccaacagttacaaataaac
cgtgatttgtcccaagcactgaatcagcaagcgcagcgcatcgatctgatttcctcacag
caacgccaggcggtcacccaaactcagcaagttcgccaggcactgagcaccatccgcgag
caagctcagtggttgggggtgtcaaccgcattgggtgaagcattgcgcgcccaagtagcc
agattgcccgatgtgccaaaatctcagcaattggatcgcgacatggcccaattgcgcgtt
cagcgcctgcaatatgaagacatgctggagaaattacagcagcaaaatgtcaaattaacc
caagacgatggcacgccactgaccactgagcaacagcgaattttggatgcccaatggcgc
acacagcgcgagttactcaactctttgctgtctggctatgacactcagattctagagctg
accaagctgaaagtcgccaatagccagctcgtggatgccctaagtgaagtgcgcgaagcg
acccaccgttacctgttttgggtggcggatgtcagcccgatatcactctcttacccgatt
aacgtcgcccaagatcttacccgtttgctgacgctcgataccctctcgcagctgagcggg
gcattcgtcatgatggtgaccacccaggacacattgctgccaattattggtgccctgctg
ttcgtcggtttcagtctcagctcacgtcgtcactatcatgcttttcttgagcgcgccagc
agtcgggtgggtaaggttacgcaagaccatttctccctgacattacgcaccgttttctgg
tcgattctgatggcgttgccattgcccgtcttgtgggcggcggttggctatggtttacaa
agtgcatggtcgtattcgatggcgattgccattggcaatgctgtcactgcgaccgtgccg
gtgctgtgggtgtttatgataagcgccgcatttgcccatccgcacggcctgtttattact
catttccgctggtcaccagcccaagtcgggcgggcaatgcgcttttatcgtatgtctgtg
tggttgattatcccactgatgatggcgctgattactttcgaaaattataacgatcgcgag
tttgccggcacacttggccggttatgctttattttgctgtgtattgccttaagtttagtg
accaatagcctcaagcgggccggtattccgctctatctggataaaaaaggctcgggtgag
aatattgttaatgcggcactatgggggcttttgctctctgcgccactgattgcggcattg
gcctctgccctgggttatctcacgacgtcacaagcattattagcccgtctggagacctcg
gttgctatctggttcttcttgttggtggtttaccatattattcgccgctggatgctgatt
cagcgccgccggattgcttttgatcgtgctaaacagcgccgggctgatattttggcgcaa
cgggcccgtggcgaggatgatacgccgcacaataacagcactgagggctccattgatgtc
gaagagccggttatcgatctggatgtgatcagcgcccaatcactgcggttggtgcgatct
attctgacgatggtcgcgttagtgtcggtgattgtgctgtggtctgagattcactccgct
ttcggtttcctggaaaacattcgtctgtgggatgtgtcatccaccattaatggcgttgag
tccgtgcaggcgatcaccatgggatctttattgattgccattctggtgatgattgtcact
gcccagttagtgcgtaacttgcctgctctgctggagctggcgctgctacagcatctggat
ctgacgcccggaacgggctacgccatttccactatcaccaagtatctgttgatcctgttt
ggtggcttactcggcttctcgatgctggggattgaatgggcgaaattccagtggctagtt
gccgcattaggtttggggttgggcttcggcttgcaggagatttttgccaactttgtatcc
ggcttgataatcttgttcgagaaaccgatccgtatcggcgatactgtgaccattcgcgat
ctcaccggtagcgtcaccaagataaacacccgggcaaccactatctctgattgggaccgc
aaagaaattatcgtgccgaacaaggcctttattaccgagcaatttattaactggtcactg
tctgactcgattactcgtgtggtgctgacagtaccggccccggcagaaaccagcagtgag
gaagtgaccgaagtcttactgaccgccgcgcgccgctgtaccttggtattggataacccg
ccaccggaggtctatttggtcgacctccagcaagggattcagattttcgagctgcgtatc
tatgccgccgaaatgggccatcgaatgccgctgcgccatgagattcaccagttaattctg
gccggttatcgtgagcacggcattacactgccgttcccaccattccaagcccgtctggaa
actctgggccgtgggcgagtggtgtcctcaagccgcccccgcgcaccgggcagtttgtaa
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