Yersinia hibernica CFS1934: D5F51_02465
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Entry
D5F51_02465 CDS
T05961
Symbol
truB
Name
(GenBank) tRNA pseudouridine(55) synthase TruB
KO
K03177
tRNA pseudouridine55 synthase [EC:
5.4.99.25
]
Organism
yhi
Yersinia hibernica CFS1934
Brite
KEGG Orthology (KO) [BR:
yhi00001
]
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03016 Transfer RNA biogenesis [BR:
yhi03016
]
D5F51_02465 (truB)
Enzymes [BR:
yhi01000
]
5. Isomerases
5.4 Intramolecular transferases
5.4.99 Transferring other groups
5.4.99.25 tRNA pseudouridine55 synthase
D5F51_02465 (truB)
Transfer RNA biogenesis [BR:
yhi03016
]
Eukaryotic type
tRNA modification factors
Psudouridine synthases
D5F51_02465 (truB)
Prokaryotic type
D5F51_02465 (truB)
BRITE hierarchy
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
TruB_N
TruB-C_2
TruB_C_2
CATSPERG_beta-prop
Motif
Other DBs
NCBI-ProteinID:
QAX77520
LinkDB
All DBs
Position
509893..510837
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AA seq
314 aa
AA seq
DB search
MGRPRRRGRDINGILLLDKPLGLSSNDVLQKVKRLFSANRAGHTGALDPLATGMLPICLG
EATKFSQFLLDSDKRYRVVARLGQRTDTSDAEGALISEREVNVTQAQMDAALDRFRGDSQ
QVPSMYSALKHQGKPLYEYARQGIEVEREARSITVYELLFIRWEGNDLELEIHCSKGTYI
RTIIDDLGELLGCGAHVSYLRRLQVATYPSERMVTLEQLAAIVETAQMEERSPNAELDSL
LLPMDSAVLNFPEVNLLPAVAAYVKQGQPVHVAGAPSEGMVRMTEGEERNFIGIGTIAED
GRVAPKRLVVEYAE
NT seq
945 nt
NT seq
+upstream
nt +downstream
nt
atgggtcgtccacgtcgtcgtggccgtgacattaacggcattctgttattggataagccg
ctgggcctctcctctaatgatgttttgcagaaagtaaaacggctctttagtgctaaccgc
gcgggccataccggtgcgctggatcctttagcgacgggtatgttgccaatctgtttaggg
gaagcgaccaagttttcccaatttttgctcgattccgataaacgttatcgggtggtggct
cgcttaggccagcgcactgatacctcggatgccgagggagcgttaattagtgagcgggaa
gtcaacgtcactcaggctcagatggatgctgcgctagaccgtttccgtggtgacagccag
caagtgccgtcgatgtattctgcactgaagcaccaaggcaagccgctgtacgaatatgcc
cgtcaggggattgaagtcgagcgtgaagctcgcagtattaccgtttacgaactgctgttt
atccgctgggaaggcaatgatctcgagctggaaatccattgttctaaaggaacttacatt
cgcaccattattgatgatttgggcgaattgttgggttgcggtgctcatgtgagttatctg
cgccgattacaagtggcgacttatcccagtgagcgcatggtgaccttagagcagttggct
gcgatagttgaaacggcacaaatggaagagcgctcaccaaatgccgaactggattcgctg
ttattgccgatggatagcgcagtgttaaacttccctgaagtcaatctgttacctgcggtt
gctgcctatgtaaaacaagggcaaccggtgcatgtcgcgggtgcgccaagtgaaggaatg
gtgcgcatgactgaaggtgaagagcgtaatttcattggcattggcacgattgcagaagat
ggtcgtgtggcgccgaaacgtttagtcgtggaatacgcggagtaa
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