Yersinia hibernica CFS1934: D5F51_02475
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Entry
D5F51_02475 CDS
T05961
Symbol
pnp
Name
(GenBank) polyribonucleotide nucleotidyltransferase
KO
K00962
polyribonucleotide nucleotidyltransferase [EC:
2.7.7.8
]
Organism
yhi
Yersinia hibernica CFS1934
Pathway
yhi03018
RNA degradation
Brite
KEGG Orthology (KO) [BR:
yhi00001
]
09120 Genetic Information Processing
09123 Folding, sorting and degradation
03018 RNA degradation
D5F51_02475 (pnp)
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03019 Messenger RNA biogenesis [BR:
yhi03019
]
D5F51_02475 (pnp)
03016 Transfer RNA biogenesis [BR:
yhi03016
]
D5F51_02475 (pnp)
Enzymes [BR:
yhi01000
]
2. Transferases
2.7 Transferring phosphorus-containing groups
2.7.7 Nucleotidyltransferases
2.7.7.8 polyribonucleotide nucleotidyltransferase
D5F51_02475 (pnp)
Messenger RNA biogenesis [BR:
yhi03019
]
Prokaryotic type
Bacterial mRNA degradation factors
RNA degradosome components
Other RNA degradosome components
D5F51_02475 (pnp)
Transfer RNA biogenesis [BR:
yhi03016
]
Prokaryotic type
tRNA degradation factors
D5F51_02475 (pnp)
BRITE hierarchy
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
RNase_PH
PNPase
S1
RNase_PH_C
KH_1
S1_2
KH_2
OB_RRP5_4th
UPF0181
aRib
Spt6_S1
S1_RRP5
KH-I_KHDC4-BBP
Motif
Other DBs
NCBI-ProteinID:
QAX77522
UniProt:
A0ABX5QW03
LinkDB
All DBs
Position
511490..513610
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AA seq
706 aa
AA seq
DB search
MLTPIIRKFQYGQHTVTIETGMMARQATAAVMVSMDDTAVFVTVVGQKKAKPGQSFFPLT
VNYQERTYAAGRIPGSFFRREGRPSEGETLTSRLIDRPIRPLFPDSFLNEVQVIATVVSV
NPQVNPDIVALIGASAALSLSGIPFNGPIGAARVGFINDQYVLNPTTDELKESRLDLVVA
GTAAAVLMVESEADILSEDQMLGAVVFGHEQQQVVIENINALVAEAGKPKWDWQPEVVNE
ELHARVAVLAAARLGDAYRITEKQERYEQVDAIKADVTDTLLAQDDTLDAAEIQDILGNV
EKDVVRSRVLRGEPRIDGREKDMIRGLDVRTGVLPRTHGSALFTRGETQALVTATLGTAR
DAQNIDELMGERTDSFLLHYNFPPYSVGETGMVGSPKRREIGHGRLAKRGVMAVMPSPSE
FPYTVRVVSEITESNGSSSMASVCGASLALMDAGVPIKAAVAGIAMGLVKDEESFVVLSD
ILGDEDHLGDMDFKVAGSRDGITALQMDIKIEGITREIMQVALNQAKGARLHILGVMEQA
ISTPRGDISEFAPRIYTMKINPEKIKDVIGKGGSVIRALTDETGTTIEIEDDGTIKIAAT
DGDKAKHAIRRIEEITAEIEVGRIYAGKVTRIVDFGAFVAIGGGKEGLVHISQIADKRVE
KVTDYLQMGQEVPVKVMEVDRQGRIRLSIKEATTPDAEAAAPEAAE
NT seq
2121 nt
NT seq
+upstream
nt +downstream
nt
ttgctgactccgattattcgtaaattccagtacggccaacataccgtcaccattgaaacc
ggcatgatggcacgccaggcaaccgctgcagttatggtaagcatggatgacaccgcagta
tttgtgactgttgttggccaaaagaaagccaaaccaggccagagcttcttccctttgact
gttaactatcaggagcgtacttacgctgctggtcgtatcccaggcagtttcttccgtcgc
gaaggccgcccaagtgaaggtgaaacactgacttcacgtctgattgaccgcccgattcgt
ccactgttcccagacagtttcctgaatgaagttcaggttatcgcgaccgttgtttctgtt
aacccacaagttaacccagatatcgtggcactgattggtgcatcagcggcactgagccta
tcaggtatcccattcaacggcccaatcggtgctgctcgcgttggttttatcaacgaccag
tatgtactgaacccaaccactgacgagttgaaagagagccgtctggacttggtcgttgcc
ggtactgctgctgcggtattaatggtcgaatcagaagcagacatcttgtctgaagatcaa
atgttgggcgcggttgtgttcggccacgaacaacagcaagttgtgattgaaaatatcaat
gcactggttgccgaagccggcaaacctaagtgggattggcagccagaagtggttaacgaa
gaactgcatgcgcgtgttgctgtattggctgctgctcgtctgggtgacgcatatcgcatc
actgagaaacaagagcgttacgaacaagttgatgctatcaaagctgatgtcactgacaca
cttttggcgcaagacgatactttagatgctgccgaaattcaggatatcctgggcaacgtt
gagaaagatgtcgttcgtagccgcgtattacgtggcgaaccacgtattgatggccgcgaa
aaagacatgatccgtggcttggatgtgcgtactggcgtcttgccacgtacccatggttct
gcgttgttcacccgtggcgaaactcaggcattggttaccgccacactgggtacagcacgt
gatgcgcaaaatattgatgagctgatgggtgagcgtactgactcattcctgctacactat
aatttccctccatattctgttggtgaaacaggcatggtgggttcaccgaaacgtcgtgag
attggccatggccgtctggcgaaacgcggtgtaatggcagtgatgccaagcccgagcgag
ttcccttacactgtacgtgtggtttctgaaatcaccgagtctaacggttcttcctcaatg
gcctctgtctgtggtgcttctttggccctgatggatgcaggtgtgccgattaaagccgct
gttgctggtatcgccatgggcctggtgaaagacgaagaaagctttgtcgtgctgtctgac
attctaggtgatgaagatcacttgggcgacatggactttaaagtggccggtagccgtgac
ggtatcaccgcactgcaaatggacattaaaattgaaggtatcacccgcgaaatcatgcag
gtggctctgaaccaagctaagggtgcgcgtttgcacattctgggtgttatggaacaggct
atcagcacaccacgtggcgatatctctgagtttgctccacgtatttacaccatgaaaatc
aatcctgagaaaatcaaggatgtgattggtaaaggtggttccgtgattcgtgcgctgaca
gatgaaactggcaccaccattgaaatcgaagacgatggtaccattaagattgcagcaacc
gacggcgataaagcaaaacatgctatccgtcgtattgaagaaattactgctgaaatcgaa
gtgggccgcatctatgcgggtaaagtgactcgtattgttgatttcggtgcctttgttgct
attggcggcggtaaagaaggtctggtgcatatttctcaaatcgctgacaagcgcgtagag
aaagtgactgactatctgcaaatgggccaagaagtgccagtgaaagtcatggaagttgat
cgccagggccgtattcgcctgagcatcaaagaagctacgactcctgacgcagaagcggcg
gcaccagaagcagcagagtaa
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