Yersinia hibernica CFS1934: D5F51_02970
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Entry
D5F51_02970 CDS
T05961
Symbol
lsrB
Name
(GenBank) autoinducer 2 ABC transporter substrate-binding protein LsrB
KO
K10555
AI-2 transport system substrate-binding protein
Organism
yhi
Yersinia hibernica CFS1934
Pathway
yhi02010
ABC transporters
yhi02024
Quorum sensing
Brite
KEGG Orthology (KO) [BR:
yhi00001
]
09130 Environmental Information Processing
09131 Membrane transport
02010 ABC transporters
D5F51_02970 (lsrB)
09140 Cellular Processes
09145 Cellular community - prokaryotes
02024 Quorum sensing
D5F51_02970 (lsrB)
09180 Brite Hierarchies
09183 Protein families: signaling and cellular processes
02000 Transporters [BR:
yhi02000
]
D5F51_02970 (lsrB)
Transporters [BR:
yhi02000
]
ABC transporters, prokaryotic type
Saccharide, polyol, and lipid transporters
AI-2 transporter
D5F51_02970 (lsrB)
BRITE hierarchy
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
Peripla_BP_4
Glyco_tran_WecG
Motif
Other DBs
NCBI-ProteinID:
QAX77607
LinkDB
All DBs
Position
complement(617718..618752)
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AA seq
344 aa
AA seq
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MKIPRLKKLALVCALGFAYITFSSISAAQAAERIAFIPKLVGVGFFTSGGKGAVDAGKEL
GVDVTYDGPTEPSVSGQVQLINNFVNQGYNAIVVSAVSPDGLCPALKRAMQRGVKILTWD
SDTKPECRSVYINQGTPNQLGSMLVDMAANQVKKDKAKVAFFYSSPTVTDQNQWVNEAKK
KIQQEHPGWEIVTTQFGYNDATKSLQTAEGILKAYGDLDAIIAPDANALPAAAQAAENLK
RDNVAIVGFSTPNVMRPYVERGTVKEFGLWDVVNQGKISVYVANEMLKKGDLNVGDKIDI
PNIGLVEVVPNSAQGYDFEAKGNGIVLLPQRVIFTKENIDKYDF
NT seq
1035 nt
NT seq
+upstream
nt +downstream
nt
atgaaaataccaagattaaaaaaactggcgctggtttgtgccctcggatttgcctatatc
acttttagctctatcagtgccgcacaagcggcggaacgcattgcatttatcccgaaattg
gtcggggtcggcttcttcaccagcggcggtaaaggtgctgtcgatgccggtaaagagctg
ggggtggatgtgacctatgatggcccgaccgaaccgagtgtttccggccaggttcagttg
atcaataacttcgtcaatcagggctataacgccattgtggtctctgcggtttcccccgat
ggcctatgcccggcattaaaacgcgcaatgcaacggggcgtcaaaattctgacttgggac
tcagacactaaaccagaatgccgctcggtgtatatcaaccaaggtactccaaatcaattg
ggttcaatgctggtcgatatggcggcaaatcaggtgaaaaaagacaaagccaaagtggcg
ttcttttattccagcccaacagtgactgaccagaatcagtgggtgaatgaagcgaagaaa
aaaatccagcaagagcaccccggctgggaaattgtcaccacccagtttggctataacgac
gccaccaaatcattacaaaccgccgagggtattttgaaagcctatggtgatctcgatgcc
attattgctcctgatgccaacgccctcccggccgcggcccaggccgcagagaacctgaaa
cgcgacaatgtggccatcgtcggtttcagtaccccgaatgtgatgcgcccttatgttgag
cgcggcacggtcaaggaattcggcctgtgggatgtggttaatcaaggcaaaatctcagta
tacgtcgccaatgaaatgctgaaaaaaggtgatttgaatgtcggcgataaaatagatatt
ccgaacattggcctggtcgaagtggtgccaaacagtgcgcaaggttatgactttgaagcc
aaaggcaacggcattgtcttactgccacagcgggtcattttcaccaaagaaaacatcgac
aaatacgatttttaa
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