Yersinia hibernica CFS1934: D5F51_06165
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Entry
D5F51_06165 CDS
T05961
Name
(GenBank) pectate lyase
KO
K01728
pectate lyase [EC:
4.2.2.2
]
Organism
yhi
Yersinia hibernica CFS1934
Pathway
yhi00040
Pentose and glucuronate interconversions
yhi01100
Metabolic pathways
yhi02024
Quorum sensing
Brite
KEGG Orthology (KO) [BR:
yhi00001
]
09100 Metabolism
09101 Carbohydrate metabolism
00040 Pentose and glucuronate interconversions
D5F51_06165
09140 Cellular Processes
09145 Cellular community - prokaryotes
02024 Quorum sensing
D5F51_06165
Enzymes [BR:
yhi01000
]
4. Lyases
4.2 Carbon-oxygen lyases
4.2.2 Acting on polysaccharides
4.2.2.2 pectate lyase
D5F51_06165
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Motif
Pfam:
Pectate_lyase_4
Motif
Other DBs
NCBI-ProteinID:
QAX78175
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Position
complement(1323490..1324596)
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AA seq
368 aa
AA seq
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MTNRINAPIVHQSARNISPLGGWAAEAGGTTGGSDATSDDIYLVFTVSELRRALQESGER
PKIIQVYGLIDVSEGIAYQDREDQKARGIVYLNANTSLIGVTENAKFIEGSIIIQNTHNV
IIHNIFIENPVDVDPQFEEGDGWNAEWDGLNIITSHHVWIDHVTFSDGRFTIDQYIEKDG
WKYVQHDGALDIKRGSDYVTVSSCRFELHDKTILIGHSDSNAEQDTGTMHVTFFNNYFTR
IIQRTPRVRFGSIHLYNNFFDNDKSDPIYPYQYSYGLGYQSSILSEKNIFLIGGLAAQCQ
VMKAFGGDKIDDSGSTFNNNTAELNSCGFDANIGWVPPYIYDAVDVTEAFADYIRNQAGS
GIQYSQLP
NT seq
1107 nt
NT seq
+upstream
nt +downstream
nt
atgaccaacaggataaatgcacctatcgttcatcaatcagcaagaaatatttcccctctt
gggggatgggcggctgaagctgggggaacaacgggagggtcagatgcaaccagcgatgat
atctatctggtattcacggtgtcggaactcaggcgagcactgcaggagtcaggggagcgc
cctaagataattcaggtatatggtcttattgatgtcagtgaaggtattgcgtatcaagac
cgggaggatcaaaaagcacgtggcatcgtgtatctcaatgcgaataccagcttaattggt
gttactgagaatgcgaaatttatcgagggctcaataattatccaaaatactcataatgtt
attattcataatatttttattgaaaacccagtagatgttgatccccagtttgaagagggt
gatggctggaatgctgaatgggatggcctcaacattattacttcacatcatgtttggatt
gaccatgtcacattcagcgatggtcgttttactattgaccagtatattgagaaagatggc
tggaaatatgttcaacatgatggtgcgctggatattaagcgcggttctgattatgttacg
gtttcatcgtgtcgctttgaattacatgataaaaccatcctgattggccacagcgatagc
aatgctgaacaagatactggcactatgcatgtgacattcttcaataattactttacgcgg
ataatacaacgcactcctcgtgttcggttcgggagcatacacctctataataacttcttt
gataatgataaatcagacccaatatatccttatcaatacagttatggcttaggttatcag
tccagtattttatctgaaaaaaatatatttttgattggcggcttagccgctcaatgccaa
gtgatgaaagcgttcggtggcgataaaattgatgacagtggctcgaccttcaataacaac
accgctgaactgaatagttgtggatttgatgcgaatataggttgggttcctccttatatc
tatgatgcagtggatgtgactgaagcatttgcagattacatccgcaatcaagccggctcc
ggcatacaatatagtcagttaccatga
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