Yersinia hibernica CFS1934: D5F51_09730
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Entry
D5F51_09730 CDS
T05961
Symbol
cmoB
Name
(GenBank) tRNA 5-methoxyuridine(34)/uridine 5-oxyacetic acid(34) synthase CmoB
KO
K15257
tRNA (mo5U34)-methyltransferase [EC:2.1.1.-]
Organism
yhi
Yersinia hibernica CFS1934
Brite
KEGG Orthology (KO) [BR:
yhi00001
]
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03016 Transfer RNA biogenesis [BR:
yhi03016
]
D5F51_09730 (cmoB)
Transfer RNA biogenesis [BR:
yhi03016
]
Prokaryotic type
tRNA modification factors
Methyltransferases
D5F51_09730 (cmoB)
BRITE hierarchy
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Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
Methyltransf_9
Methyltransf_23
Methyltransf_31
Methyltransf_25
Methyltransf_12
Methyltransf_11
CMAS
PCMT
NpmA
Motif
Other DBs
NCBI-ProteinID:
QAX78809
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All DBs
Position
2062151..2063122
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AA seq
323 aa
AA seq
DB search
MIEFGDFYRLIAKGPLSPWLDTLPAQLSAWQRESLHGKFKTWFNAVEHLPQLTPTSLELR
DGVRAEMSPPISAGQREGMENMLRALMPWRKGPFSLYGLDIDTEWRSDWKWQRVLPHISP
LAGRTILDVGCGSGYHLWRMIGEGAHLAVGIDPMQLFLCQFEAIRKLLGGDQRAHVLPLG
IEQLPELAAFDTVFSMGVLYHRRSPLDHLYQLKNQLVNEGELVLETLVVEGDSQQVLVPG
DRYAQMRNVYFIPSAPALKAWLEKCGFVDVSIADMAVTTTDEQRRTDWMTSESLAEFLDP
NDPSSTVEGYPAPLRAVLIARKP
NT seq
972 nt
NT seq
+upstream
nt +downstream
nt
atgattgaatttggcgatttttaccggctcattgccaaaggcccgttaagcccatggtta
gataccctgcccgcgcaactcagtgcctggcagcgcgaatccttacacggtaagtttaaa
acctggttcaatgccgttgaacatttgccgcaactcacgccaacatcactagagttacgc
gatggcgtacgggcagaaatgtccccaccgatcagtgccggtcagcgtgagggcatggaa
aatatgttgcgcgccctaatgccatggcgcaaaggccctttttcgttatatggcttagat
attgataccgagtggcgctccgactggaaatggcagcgggtattgccgcatattagccca
cttgcgggccgcacgattcttgatgtcggctgcggcagcggatatcacctatggcgcatg
attggcgagggcgctcatctggcagtgggcatcgacccgatgcagctatttttatgccag
tttgaagctattcgcaagttgctagggggtgaccaacgcgcccatgtactgccgctgggt
atcgagcaactgccagaactggccgcctttgatactgtattttcgatgggcgtgctgtat
caccggcgctcaccattggaccacctctatcagctcaaaaatcagctggtcaatgagggg
gaactggtacttgaaactttagtggtcgagggtgatagccagcaagtattggtgcccggc
gatcgttatgcccagatgcggaatgtctattttattccgtcagccccggcgctaaaagcc
tggttagaaaaatgcggttttgttgatgtcagcattgccgatatggccgtgaccaccacg
gatgaacagcgccgtaccgactggatgaccagcgagtcattggctgaatttctcgacccc
aatgaccccagtagcacggttgagggttatccggcccccctcagagccgtattgattgcc
cgtaaaccataa
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