Yersinia hibernica: D5F51_10060
Help
Entry
D5F51_10060 CDS
T05961
Symbol
pgaA
Name
(GenBank) poly-beta-1,6 N-acetyl-D-glucosamine export porin PgaA
KO
K11935
biofilm PGA synthesis protein PgaA
Organism
yhi
Yersinia hibernica
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
PgaA_barrel
TPR_19
TPR_14
TPR_7
TPR_2
TPR_11
TPR_16
TPR_1
Motif
Other DBs
NCBI-ProteinID:
QAX78869
UniProt:
A0A481QEE6
LinkDB
All DBs
Position
complement(2131605..2134073)
Genome browser
AA seq
822 aa
AA seq
DB search
MYNAFTTLLRPLHRHRMTLLALLISGLSVNPVLAETQYDSLIIKARAGDTAPVLDYLQKE
AKAGPLNSGQVDDWLQIAGWAGRDQEVIDVYERYHSSMNLSSRGLASAARAYRNEKRWDQ
ALALWQSSLKKDPTNPDLITGMIMTQADSGRGGAALQQAKELAERNPSAQNYMTLSYLNR
ATNRNYDALQASSEAVRLAPESDEVLRNHLEILQRNRIVDPALQLAKENPKLVSAEEYRQ
LERDAAAEQVRMAVLPTRSETERFYIADQALADYQDLLTRWSKEPEAQADYQRARIDRLG
ALLVRRHTEELIKEYESMEAEGYKMPDYARRWAASAYIDRRMPEKAAPILASLYYADGKT
FRNSDDLLDADDLYYALNESEQLDKAHQFAKNYSEQTPYQVGVYGLPGKEPNDDWMEGQT
LLVQSLVALNDLPAAQKKLETLSSTAPANQNLRIALAGVYLARDLPRKSEQELKAVESLA
PRSLILERAQAETAMDLQEWRQMELLTDDVIARSPEDVPSQELDRQRKIHNMYELRVTGN
RTISSNSPVSGNKDYGVETLLYSPPIADNWRVFGGGSYNNAQFEEGTGINRVMRLGGEWT
SRDHWVEAEVNNQNYGFGNKTGARLSTWYDFNDHWRVGGQVERLAKDTPLRALKNNIYAN
SASAFVLWKADDRRDVEFNVTPSDFSDGNKRWEYELNGRQRIWTGPYLTADFNLGLAAST
NTKEDVIYYNPKRDFTYLPAVTINHIMYRHYKTIWSQQVQLGVGGYWEKNYGNGLVTTAS
YGQRVQWNDVVDTGVAVTYDKRPYDGTREHDLSLAFDLNYRF
NT seq
2469 nt
NT seq
+upstream
nt +downstream
nt
atgtataacgcatttacgacactactgcgcccgttgcaccggcacagaatgactttatta
gcgctattaatttccggcctctcagttaatccagttttggcagaaacacaatatgattca
ttaatcatcaaagccagagctggggataccgcaccggtgctcgattatttacaaaaagaa
gctaaagccgggccacttaatagtggtcaggtcgatgactggttgcaaattgcggggtgg
gctgggcgtgatcaggaggttattgatgtgtatgagagatatcattcctcaatgaatctc
tcctcgcgggggctggcttctgcggcccgagcatatcgtaatgaaaagcgttgggatcaa
gccctggcattgtggcaaagcagtttaaagaaagaccccaccaaccctgatcttattacc
ggtatgatcatgacccaggctgattcgggccgtggcggtgcggcgttacaacaggcaaaa
gagttggctgagcgtaacccttccgcgcaaaattatatgacactgtcttatctcaaccgt
gccaccaatcgcaactatgatgcattgcaagcttccagcgaagcagtacggttagcccct
gaatctgatgaggttttaagaaatcatcttgagattttgcaacgaaaccggattgttgac
cctgcattacagctcgccaaagagaacccgaaattagtttcagcagaagagtatcggcaa
cttgagcgagatgctgccgcggaacaagtgcgtatggcggtattaccaacgcgcagtgaa
actgaacgtttttatattgccgatcaggcattggcggattatcaggatttattaacacgt
tggagcaaagagccagaggctcaggccgattaccagcgggcgcgaattgatagactcggc
gcattattggttcgtcgtcataccgaagaactgattaaagaatatgaaagtatggaagct
gaaggctacaaaatgcctgactatgcgcgtcgctgggcggcttccgcgtatattgaccgc
cggatgccggaaaaggccgcgccaattctagccagtttgtattacgccgatggtaaaacc
ttccgcaacagtgatgatttgctggatgccgatgatctctattacgcactcaatgaaagt
gagcaattagataaggcgcatcaattcgctaagaactatagcgaacaaacgccttatcaa
gttggggtgtatggtttgccggggaaagagccgaatgatgattggatggagggtcagacg
ctattggtgcaatccctggtggcgctcaatgacctgcctgcagcacagaaaaagctggag
acattatccagtaccgccccggctaaccagaatttacgtattgccttagccggtgtttat
ctggcgagggatttaccacgcaaatctgaacaagaattgaaggcggtagaatcattggca
cctcggagcctgattttagagcgcgcacaggctgaaacggcgatggatttgcaggaatgg
cgtcaaatggagctgttaacggatgatgtgattgctcgctcgcccgaagatgttccatca
caagagttagatcgccaacgtaaaattcataatatgtatgaattgcgcgtgacaggtaac
cgaacgatttcctcgaatagcccggtcagtggcaataaagactacggtgttgaaactctg
ctttatagtccgcctattgccgataactggcgggtattcggcggcggtagttataacaat
gcgcaatttgaagagggcaccggcattaatcgtgttatgcgattaggtggtgagtggact
tctcgcgaccactgggttgaggcggaggtaaataaccagaattatggttttggtaataag
accggcgcacgtttatcgacttggtatgattttaatgatcactggcgggtggggggacaa
gttgaaagattggcgaaagatactcctctgcgggccttaaaaaataacatctacgccaac
agtgcttcagcttttgtgctctggaaagccgatgaccgccgtgatgtcgaatttaatgtg
acaccgtcagatttttcggatggtaacaaacgttgggaatatgagctgaatggacgtcag
cgtatctggacagggccttacctgaccgcagatttcaatctgggcttggcggcgagcacc
aacaccaaagaagacgtgatttattataacccgaagcgtgattttacctatcttcctgcg
gtgacgataaatcacattatgtatcgtcattataaaacaatctggagccagcaagtgcaa
ctcggtgtcggtggctactgggagaaaaactacggaaatggcttggtcacaacagccagt
tatgggcaacgggttcaatggaatgatgttgttgatactggcgtcgccgtgacctatgac
aagcgcccctatgatggcacccgtgagcatgatctctcgctcgcttttgatttgaattac
cgtttctaa
DBGET
integrated database retrieval system
