Yersinia hibernica CFS1934: D5F51_12180
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Entry
D5F51_12180 CDS
T05961
Symbol
rlmF
Name
(GenBank) 23S rRNA (adenine(1618)-N(6))-methyltransferase RlmF
KO
K06970
23S rRNA (adenine1618-N6)-methyltransferase [EC:
2.1.1.181
]
Organism
yhi
Yersinia hibernica CFS1934
Brite
KEGG Orthology (KO) [BR:
yhi00001
]
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03009 Ribosome biogenesis [BR:
yhi03009
]
D5F51_12180 (rlmF)
Enzymes [BR:
yhi01000
]
2. Transferases
2.1 Transferring one-carbon groups
2.1.1 Methyltransferases
2.1.1.181 23S rRNA (adenine1618-N6)-methyltransferase
D5F51_12180 (rlmF)
Ribosome biogenesis [BR:
yhi03009
]
Prokaryotic type
rRNA modification factors
23S rRNA modification factors
D5F51_12180 (rlmF)
BRITE hierarchy
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
Methyltransf_10
MTS
Methyltransf_12
PrmA
Motif
Other DBs
NCBI-ProteinID:
QAX79251
LinkDB
All DBs
Position
complement(2563546..2564553)
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AA seq
335 aa
AA seq
DB search
MLSYAPENAYQRVGTMENKKIFPKEKSGLHPRNRHRSRYDFAALSASCPELIPFLAPTAY
GDISIDFASPLAVKMLNKALLKHFYGIEYWDIPADCLCPPIPGRADYIHHLADLLASCND
GVIPQGKNIALLDIGVGANCIYPIIGQREYGWRFTGTDIDSPALSAAKMVVAMNPALKNS
LRLKLQKNPQAIFDGILAVNERYDATLCNPPFHGSAEEAAATTRRKLHKLGKGDVAAQPV
QNFGGKNSELWCEGGEEGFVSRMVAESATKAQNCFWFTSLISKKTTLPAIYHALRYANAV
EVRTIDMAQGQKVSRFVAWTFLTPEQQAAWKAERW
NT seq
1008 nt
NT seq
+upstream
nt +downstream
nt
atgctatcttacgcgccagaaaatgcctatcagagagtcggtacgatggaaaacaaaaaa
atattcccgaaagaaaaaagtggcttgcacccgcgcaaccgtcatcgctcacgttacgat
tttgccgcgctttcagcgagttgccctgagctaattccatttttggcgccaactgcttat
ggtgatatttctatcgactttgcctctccactggcggtgaaaatgctcaataaagcattg
ctgaaacatttttatggcattgaatattgggatattccagctgactgtttatgccccccc
atccccgggcgtgcagattatatccaccacttggctgatttattggccagctgcaatgat
ggtgttatcccgcagggtaaaaatattgctttgttggatattggtgtgggtgcgaactgt
atttatcccattattggtcaacgagaatacggctggcgtttcactggaactgacattgac
tcgcctgcactcagtgcggcgaagatggtggtcgccatgaacccagcgctaaaaaatagt
cttcggcttaaactgcaaaagaatccacaggcgatattcgacggtattctggccgtgaat
gagcgctatgatgccactctgtgtaatccgccattccatggctcagcagaagaggcggca
gcaaccacgcggcgcaaattgcacaagctgggtaaaggtgacgtcgccgctcagccggtg
caaaattttggtggcaaaaatagcgagctttggtgtgaaggcggggaagaaggatttgtt
agccgcatggtggcagagagtgcaacaaaagcacaaaactgtttctggtttacctcgctg
atttctaaaaagacaacattaccggctatttatcatgcgctgcgttacgccaatgctgtt
gaggttcgtactattgatatggcccaggggcagaaagtgagccggtttgtcgcctggacg
ttcctaacaccagagcagcaagctgcctggaaagcagagcgctggtaa
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