Yersinia hibernica: D5F51_14045
Help
Entry
D5F51_14045 CDS
T05961
Name
(GenBank) ATP-dependent dsDNA exonuclease
KO
K03546
DNA repair protein SbcC/Rad50
Organism
yhi
Yersinia hibernica
Brite
KEGG Orthology (KO) [BR:
yhi00001
]
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03400 DNA repair and recombination proteins [BR:
yhi03400
]
D5F51_14045
DNA repair and recombination proteins [BR:
yhi03400
]
Prokaryotic type
DSBR (double strand breaks repair)
HR (homologous recombination)
RecBC pathway proteins
D5F51_14045
Archaeal homologous recombinant proteins
D5F51_14045
BRITE hierarchy
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
SbcC_Walker_B
AAA_23
AAA_29
ABC_tran
AAA_21
cobW
SMC_N
nSTAND3
NTPase_1
DFP
Motif
Other DBs
NCBI-ProteinID:
QAX79582
UniProt:
A0A481QEJ9
LinkDB
All DBs
Position
2954353..2958042
Genome browser
AA seq
1229 aa
AA seq
DB search
MRILSLRLKNINSLQGEWKIDFTAEPFASSGLFAITGPTGAGKTTLLDAICLALYHQTPR
LNVTPSQNELMTRHTAESLAEVEFEVKGTRYRAFWSQRRAKNSPEGNLQAPKVELALCED
GKILADKVRDKLDMIAAITGLDFGRFTKSMLLSQGQFAAFLNADANDRAELLEELTGTDI
YGRLSEHVFEQHKQAKLALDTLHQRASGIELLNEEQRLALAQQLDALSEQEKQFTAEQHV
NQNQINWLTHWQQQQKNVLEYQQQQQLIEQEYQQAQPELQRLARSEPAEKLRPLLHERAR
SLQDLQQIQLRVTTLTAQQKQLQTQLTPLAHALEQANLARQQQAARQHEQETLIEQKVVP
LDNIIAQQQHALMLLATQLQQLRSKEQHVKQQVELNEQQLKQTHQRQQQLTEYTHQHAHH
QHWEKNLPLWREQFRQLHIQQKQLVESEQQLQQEVALLSSLQQQIATLNEQEKQQQTALA
QANAQAGSIQQQLSALEQQQPLAQLHQQLSELQQQRPVRQQLAALSPLAQQVQALHDKQQ
QQLAGQQQQRQQLEQQLAEKRQLYKQQKQHLTDLEALLESEKKIVKLEAERAKLQPGKAC
PLCGALDHPAIIEYQSVKPSETAMRVEELRLQVEQLFTVGTELRTQVANAQQQQLRLEQE
LQYSQQQLTDYQQQWQTLTQPLALTFALNEPTALAAWLQQQEQSEQICQQRRTEYEQLNQ
QYQQAKDILAQVEQQQQKHQQQLTFVIQRQQDAQQSHQKLLLQQQHQQAEWVKTRQDFSH
TLAELSLSLPETDQQQNWLSLREEENQHWQQYQQELQQLALAQKALETQIENERRHLQEC
IDQLSALSQQHQQAETLFQQQQQQRQALFGDIQVTEARQLLRQQQQQAELTQQNASHALQ
QAQSQLNLLSGELAALLQQKQQSQLRAAAAQTELQHALADSEFKDEDALTSALLNEEERQ
RLQQLKQQLSERLQQAHIRQQQASDALAQLILSCPAGVSQTSELAILQQRSEQLLAQLKA
NTLRQGELRNQLESDTVRRGNQHTLFEQIERSQQQYDDWSYLNHLIGSKEGDKFRKFAQG
LTLDHLVYLANNQLSRLHGRYQLQRKTSDALELQVVDTWQADAIRDTRTLSGGESFLVSL
ALALALSDLVSHKTSIDSLFLDEGFGTLDAETLDTALDALDSLNASGKTIGVISHVEAMK
DRIPVQIKVKKVNGLGVSRLDNIFRVNQD
NT seq
3690 nt
NT seq
+upstream
nt +downstream
nt
atgagaattttaagtttacggctgaaaaatattaattctctacaaggtgaatggaagatt
gatttcactgcagagccctttgccagcagcggattattcgctatcaccggcccgacaggg
gcgggtaaaaccacgctgcttgatgccatttgtctcgcgctataccaccaaactccgcgt
ttgaatgtcactcctagccaaaacgaactgatgactcgccacactgcggagtcgctagct
gaagttgaattcgaggtaaaaggaacacgttatcgcgcgttctggagccagcgccgtgcc
aaaaatagcccggagggaaatctacaagcccctaaagttgagctggcgctgtgtgaagat
ggcaaaatcctggcggataaagtgcgtgataagcttgatatgattgctgcgatcaccgga
ctggattttggccgattcaccaaatcgatgctgctatctcaggggcaattcgccgcgttc
cttaatgccgatgctaatgaccgcgcggaattattggaagaattaaccggcaccgatatc
tatgggcggttatctgaacatgtttttgaacagcataagcaggccaagctcgcgctagat
acattgcaccaacgtgccagtggtattgagcttcttaatgaagaacagcgtttagcttta
gcacaacaattagatgcactcagtgaacaagaaaaacagttcaccgcagagcaacacgtg
aatcaaaaccaaataaattggctcacccattggcaacagcagcaaaaaaatgtactcgaa
tatcaacaacaacagcagctcattgagcaagaatatcaacaagcacagcccgaactgcaa
cgactggcccgcagtgaacccgctgaaaagttacgccccttattgcatgagcgcgcacgt
agcctacaggatttgcagcagatacaactgcgtgttaccacactgacagcacaacaaaag
caacttcagacacaacttacaccactagcccacgcactggaacaggccaatcttgctcgc
caacagcaagcagctaggcagcatgaacaagaaacactgatcgagcaaaaagtcgttcca
ctggataacattattgctcaacagcagcacgcattaatgctacttgccacacaactacag
cagttacgcagtaaagaacagcatgttaaacaacaagttgaattaaatgagcaacagtta
aagcaaacccaccagcgccagcagcaactgacggagtatacccaccagcatgctcatcat
cagcactgggaaaaaaatctacccttgtggcgagagcaatttcgccaattacatattcag
caaaaacaattggttgaaagcgagcagcaattacagcaagaagtcgcattgctcagctcc
ttacaacagcaaatcgccacactaaatgaacaagaaaaacaacagcaaaccgcattagcc
caagccaatgctcaggcgggcagcattcagcaacaattgtcagcacttgaacagcaacaa
cctttagcacaattacaccaacagctgtctgaactccagcaacagcggccagtgcgacag
caattagccgcgttatcaccgctggcacaacaagtacaagcgctgcatgacaaacaacag
caacaattagcaggtcaacaacagcagcgacaacaactcgaacagcagttggcagaaaaa
cgtcagttatataaacaacaaaaacaacatctgacggatctggaagctttactggagagc
gaaaaaaaaatagtcaagttagaggcagagagagccaaactgcaaccggggaaggcatgc
ccattatgtggggcattggatcaccccgctattattgagtatcaatctgtcaaaccctca
gaaacggccatgcgagttgaagaactgcgacttcaggttgagcagcttttcactgtagga
acagaattacgcactcaggtagcaaatgcacaacagcagcagttacgcctagagcaagag
ctacagtacagccagcagcaattgactgattatcaacaacaatggcaaacactgacacaa
ccactggcgctgacatttgccttgaatgaacctacggctttagccgcctggctacagcaa
caggaacaatcagagcaaatctgccaacagagacggactgaatatgaacagctgaatcag
caatatcaacaagctaaagatattctggctcaggtagaacagcagcagcagaagcatcaa
cagcaattaacattcgtgattcagcgccaacaagatgcccagcaatctcaccagaaactg
cttttacaacagcaacatcaacaagctgagtgggtaaaaacgcgccaagattttagtcat
accctggcagaactatcactatcgctacctgaaacagaccaacaacagaactggctatct
ctgcgagaagaagaaaatcaacactggcagcagtaccaacaagagctgcagcagttggct
ctagcccaaaaagcgctggaaacgcagattgaaaatgagcgtcgccatttacaagaatgc
attgaccagctctcggcgctcagccaacagcatcaacaagccgaaaccttgttccagcaa
caacagcaacaacgccaggcactgtttggtgatattcaggtgacagaggcacgccagtta
ttacgccaacagcagcaacaggccgagttgacacagcagaatgcatctcacgcgctgcaa
caggcacaatctcaacttaacttgctatccggtgagttagcggcgctgctacagcaaaaa
cagcaaagtcagctgcgcgcggctgcagcccaaactgaattacaacacgcattggcagac
agtgaatttaaggatgaggatgccttaaccagcgcattactcaatgaagaagaaaggcaa
cgtttgcagcaattaaagcaacaattgagcgaacggctgcaacaagcacacatccgccag
cagcaagccagtgacgcgctagcacaacttatactctcttgccccgcaggggtcagccaa
acctccgaattggcaatattacaacagcggtcagagcagttactggcccaactgaaagcc
aatacattacggcaaggcgaattacgcaatcagttagaaagcgacacggttcgccgtggc
aaccaacatacgttatttgagcaaattgaacgtagtcagcaacaatatgatgactggagc
tacctcaatcatttaatcggttccaaagaaggcgataaattccgcaagtttgcacaaggt
ctgacactcgatcatttagtctatctggcaaataaccaactcagtcggctgcatggccgc
taccaactgcagcgtaaaaccagcgatgcgctggagctgcaagtggtggacacctggcaa
gcagacgctatccgtgatacccgcacactgtcagggggagaaagcttcttagtcagttta
gccctagccttggcgctatcagatttggtcagccataaaaccagtattgactcgctattc
cttgatgaaggctttggcaccttggatgcagagacgctggatactgcactggatgccctt
gatagcctgaatgcctcaggtaaaaccattggggttatcagccatgtcgaagcaatgaaa
gaccgaattccagtgcaaattaaagttaagaaagtcaatggattgggggttagccgctta
gataatatcttccgagtcaatcaagactga
DBGET
integrated database retrieval system