Yersinia hibernica CFS1934: D5F51_16270
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Entry
D5F51_16270 CDS
T05961
Name
(GenBank) serine hydroxymethyltransferase
KO
K00600
glycine hydroxymethyltransferase [EC:
2.1.2.1
]
Organism
yhi
Yersinia hibernica CFS1934
Pathway
yhi00260
Glycine, serine and threonine metabolism
yhi00460
Cyanoamino acid metabolism
yhi00630
Glyoxylate and dicarboxylate metabolism
yhi00670
One carbon pool by folate
yhi00680
Methane metabolism
yhi01100
Metabolic pathways
yhi01110
Biosynthesis of secondary metabolites
yhi01120
Microbial metabolism in diverse environments
yhi01200
Carbon metabolism
yhi01230
Biosynthesis of amino acids
yhi01240
Biosynthesis of cofactors
yhi04981
Folate transport and metabolism
Module
yhi_M00140
C1-unit interconversion, prokaryotes
Brite
KEGG Orthology (KO) [BR:
yhi00001
]
09100 Metabolism
09101 Carbohydrate metabolism
00630 Glyoxylate and dicarboxylate metabolism
D5F51_16270
09102 Energy metabolism
00680 Methane metabolism
D5F51_16270
09105 Amino acid metabolism
00260 Glycine, serine and threonine metabolism
D5F51_16270
09106 Metabolism of other amino acids
00460 Cyanoamino acid metabolism
D5F51_16270
09108 Metabolism of cofactors and vitamins
00670 One carbon pool by folate
D5F51_16270
09150 Organismal Systems
09154 Digestive system
04981 Folate transport and metabolism
D5F51_16270
Enzymes [BR:
yhi01000
]
2. Transferases
2.1 Transferring one-carbon groups
2.1.2 Hydroxymethyl-, formyl- and related transferases
2.1.2.1 glycine hydroxymethyltransferase
D5F51_16270
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Paralog
Gene cluster
GFIT
Motif
Pfam:
SHMT
Aminotran_1_2
Beta_elim_lyase
Aminotran_5
Motif
Other DBs
NCBI-ProteinID:
QAX79964
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Position
complement(3439315..3440568)
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AA seq
417 aa
AA seq
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MLKREMNIADYDADLWRAMEQEVVRQEEHVELIASENYTSPRVMQAQGSQLTNKYAEGYP
GKRYYGGCEYVDIVEQLAIDRAKELFGADYANVQPHSGSQANVAVYSALLQPGDTVLGMN
LAHGGHLTHGSPVNFSGKLYNIVPYGIDESGKIDYEDMARQAEIHKPKMIIGGFSAYSGI
VDWAKMREIADSIGAWFFVDMAHVAGLVAAGVYPNPVPHAHVVTTTTHKTLAGPRGGLIL
AKGGDEDLYKKLNSSVFPANQGGPLMHVIAGKAVALKEAMEPEFKVYQQQVAKNAKAMVS
VFLERGYKVVSGGTDNHLFLLDLVDKNITGKDADAALGHANITVNKNSVPNDPKSPFVTS
GVRIGSPAITRRGFKEEESRELAGWMCDVLDNINDEATIERIKQKVLAICARFPVYA
NT seq
1254 nt
NT seq
+upstream
nt +downstream
nt
atgttaaagcgtgaaatgaacattgccgattatgatgcagatctatggcgtgcaatggag
caagaagtggtgcgccaggaagagcacgtcgagctgattgcctctgagaactacactagc
ccgcgtgttatgcaggcacaaggttctcagttgacgaacaaatatgctgaaggctatccg
ggcaagcgttactacggtggctgtgagtatgtcgacattgtagaacagctggctattgac
cgcgctaaagagttgttcggtgcagattacgccaacgttcagccgcattccggttctcag
gccaacgtggcggtttactcagcgttgctgcaacccggtgatacagttctggggatgaac
ctggcgcacggcggccatttgacccacggctcaccggttaacttctccggtaaactgtac
aatatcgtgccttacggtattgatgagtctggcaaaattgattatgaagatatggcgcgt
caggccgaaattcataaaccaaaaatgatcatcggcggcttctctgcttattccggtatt
gttgattgggcaaaaatgcgcgaaatcgctgatagcatcggcgcatggttctttgtcgat
atggctcacgtagccggtctggtagcggcgggcgtttaccctaaccccgtgccacatgcg
catgtcgtgactacgaccacgcacaaaacattggctggcccacgcggcggcttgattttg
gcgaaaggtggcgatgaagatctgtataaaaaactgaactcctctgtgttcccggcgaac
cagggcggcccattgatgcatgtcatcgcgggtaaagcggtcgcgttgaaagaagccatg
gagcctgagtttaaagtttatcagcagcaagtggctaagaatgctaaagccatggtgtcg
gtattcttggaacgtggctacaaagtggtgtctggtggtacagataaccacctgttcttg
cttgatttggttgataaaaatatcaccggtaaagatgccgatgctgcgttgggtcatgcc
aatattactgtgaacaaaaacagcgtgcctaacgacccgaaaagcccattcgtcacttct
ggtgtgcgtattggtagcccggcgattactcgccgtggtttcaaagaagaagagtcgcgc
gagctggcgggctggatgtgtgatgtgttggataacatcaacgacgaagcgaccatcgag
cgcatcaagcagaaagttttggctatttgcgcccgtttcccggtttacgcataa
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