KEGG   Yersinia hibernica CFS1934: D5F51_16600
Entry
D5F51_16600       CDS       T05961                                 
Symbol
tssM
Name
(GenBank) type VI secretion system membrane subunit TssM
  KO
K11891  type VI secretion system protein ImpL
Organism
yhi  Yersinia hibernica CFS1934
Pathway
yhi03070  Bacterial secretion system
Brite
KEGG Orthology (KO) [BR:yhi00001]
 09130 Environmental Information Processing
  09131 Membrane transport
   03070 Bacterial secretion system
    D5F51_16600 (tssM)
 09180 Brite Hierarchies
  09183 Protein families: signaling and cellular processes
   02044 Secretion system [BR:yhi02044]
    D5F51_16600 (tssM)
Secretion system [BR:yhi02044]
 Type VI secretion system
  Imp/Vas secretion system core components
   D5F51_16600 (tssM)
SSDB
Motif
Pfam: IcmF-related_N IcmF-related IcmF_C IcmF_helical
Other DBs
NCBI-ProteinID: QAX80019
LinkDB
Position
complement(3505881..3509714)
AA seq 1277 aa
MSYFNRLLSGWIMKRLLLVSCFILLAAVIWFLGPFLGFGEVRPLEGYEPRIIFLLVALAL
LLGFWFNVPRFIIFAVAACAAVWVIAPFILIGDSHPLDNPLRRGAIIAFIAFITILYGVW
RFMRALAINPALLDNFINPKKNQPEVGPDLSEINAMIRNGINYVRRIHSGIPTWKRFFVS
SHWRSELPWFMVMGTKSAGKTSLILSSGQDFPLPEQLNRVGKDNLPTSHCECLFANDALF
LDTAGKYIDEGKENQIEWNGILKALKKYRPVKAVNGVIVAISVTDILDKSKAELLNLSAT
LRARLDDVRGALGVRFPVYVVITKLDQLSGFDEYFRNLTAEEREQIWGVTFPYNEGKGQA
DMDLGQRISSELTLLENRISSNMHVRQQEEYSVIDRKGMYALPQDFRMLSQRVTEVLQNV
FFASRFDETKFHTTLRGIYFVSSCQPANIALLNNSTLIQKWRNVIGHNKPASPASISLKN
EDEGQLISEAAYGKQYFLKKLFRDVITKDGDLVSYNLTVQSKYRFQNLLGHVACIGVAVW
LVWAFLVSFQHNDGYLRAVGTKLEQLDSSVSRYVKTTNEQMLPALLNATQQLPEYGTLDV
ENPDLEWRYGLYTGGAISRGASSLYQFFLQKYLFPMIEQESEIALKNAINAADNEAVYSA
LKTYLMLTDEEHFDQHFVVDQVTNAWQKNGKIEPYEEKGIFASHLNMLFSQKEWRQYGQP
ADSELIKRARAMLAEKTVTARLWGRVQSELNREAPANLTLRKMVGENATQVFTLSDDELL
HEGVPGLYTHAGYHQVVKKKLTPLLMQLQQEDRWVMGQPASSLFDPLALQQDVLTAYLKE
YTQYWKRFLSSVRLISVDANSGEHAEGLSMDIALLRTLVAENSPLLNLAKQAVKETTLVE
KEKDKTLLDDVTIRNQGNLINQAKKVQEKIAFRENKLVQEFVDSRFDALRAFVNGEPSDG
GRDSNLSILQGTQMSRVIGALNDQYTRLVVLNSAFEYGDIPPMSNGGERMAIESQTWPDP
FSNIIAPLLTGSSQKFENKVISQTSKAIDTGIGEICRNTLQGRYPFADSKKVVSLNEFER
FFGANGTVDSYFKKNLESKVDTTTTPWRYKGSASSEGLEFFEQAALIKDALFNGNEGRKV
ALDFSVSVRYLAPSITQLIMNFDGNVVRYSHGPITPSFFKWPGIRQGTMVSLTAQRQEAS
AMPDIMLRGPWAILKWADMAHEVEQDADGTQRLTFLMGKDRVELEVSGLTYGNESISELL
RGFQCPSAVNDNTNEIW
NT seq 3834 nt   +upstreamnt  +downstreamnt
atgtcttattttaatcgattgctttctggttggatcatgaaacgactattactggttagc
tgctttatattgctagccgcagtaatatggtttttagggcctttcctcggatttggcgag
gtgcgacctctcgaaggttatgaacccagaattattttcttattggtggcattggccctg
ttattgggtttctggtttaacgtgccccgatttattatttttgcggtagccgcttgcgcc
gcagtttgggttattgccccatttatattgattggcgatagccaccctttagataatccg
ttacgccgtggcgctattatcgcctttatcgcgtttatcaccattctttatggtgtgtgg
cgctttatgcgggctttagctattaatccagcattattggataattttattaatccgaag
aaaaatcaacctgaagttgggcctgatctttctgaaattaatgcgatgatccgtaatggc
ataaattatgtgcgccgcattcatagcggaatcccaacctggaaacgtttctttgtttct
agccactggcgttccgagctgccttggttcatggtgatgggcactaagagtgccggaaaa
acctctttgatcctgtcttcaggacaagattttccattaccagaacagctaaaccgcgtt
ggtaaagataatttgcctacgtctcattgcgaatgtttattcgctaatgatgctctgttt
ttagatactgctggtaaatacattgatgagggtaaagagaaccagattgaatggaatggt
atcttaaaggcgcttaaaaagtatcgtccagttaaagccgttaatggcgtgatcgtggct
atttctgtcactgatattttggataaaagcaaagctgagttacttaatttatcggcaaca
ttgcgggcccgtttagatgatgtccgcggtgctctgggggttcgttttcctgtatatgtc
gtgatcacgaaactggaccaactatctggttttgatgagtattttcgcaatttaactgct
gaagaacgtgagcaaatctggggtgttacttttccttataatgagggaaaagggcaagca
gatatggatcttgggcagcgcattagcagtgagttgacgctacttgagaatcgtatcagt
agcaacatgcatgtccgccagcaggaagaatattctgttattgatcgtaaaggtatgtat
gcgctgcctcaggatttcagaatgttatcccagcgggttactgaagttttgcaaaatgtt
ttctttgcatcgcgttttgatgaaacaaaattccataccacattacgtgggatttatttc
gtcagcagttgtcagcccgcgaatattgcactgttaaataacagtactcttattcagaag
tggcgcaatgttataggccataataaaccagcatctccggcgtctatttctctgaaaaat
gaagacgaaggtcagttaattagtgaagctgcttatgggaagcaatatttccttaagaaa
ctgttccgtgacgtgatcaccaaagatggcgatttagtgagttataacctgacggtacag
tccaaatatcgtttccaaaacttgttagggcatgttgcttgtattggtgttgccgtgtgg
ttggtgtgggcattcttagtgagtttccagcataacgatggttatttacgggcggtaggt
accaaacttgagcaattagatagctctgttagccgctatgttaaaaccaccaatgagcag
atgttacctgcgttgttgaatgctacccagcaattacctgaatacggtacgttggatgtt
gaaaacccagatcttgaatggcgctatggcttatataccggtggcgcaatatctcgtggg
gcgagcagtttgtatcagttcttcttacaaaaatatctgttcccgatgattgagcaagaa
tctgaaattgcgcttaaaaatgctatcaatgcagcggacaacgaagcggtatatagcgcg
ttgaaaacctatttaatgctgacggatgaagaacatttcgatcaacattttgtggttgat
caagtgacgaatgcttggcagaaaaatggaaaaatcgagccgtatgaagagaaaggtatt
tttgcttctcatttaaatatgttgtttagccagaaagaatggcggcaatacggtcagcct
gctgatagtgaactgattaagcgtgcaagagcaatgctggcggagaaaacggtcaccgcc
agactttggggccgtgttcaatctgagttgaacagagaagctccggccaatctgacattg
cgcaaaatggtaggtgaaaacgcaacacaggttttcaccttgtcagatgatgagctactg
catgaaggggttcctgggttgtatacccatgccggttatcatcaggtggttaaaaaaaag
cttacacctctgctgatgcagttacagcaagaagatcgctgggtgatggggcaacccgcc
tcatctttatttgatcccctagcgctgcagcaagatgtactgactgcgtatttgaaagaa
tatacccagtactggaaacgctttctctccagtgtgcgcctgatttctgttgatgctaac
agtggagagcatgccgaaggattgtcgatggatatcgccttattgagaacacttgtggct
gaaaactcgcctttgctcaatttggcaaagcaggcagtaaaagaaaccacattggtggag
aaggaaaaagacaaaacgctgcttgatgatgtaacgataagaaatcaaggaaacctcatt
aaccaagctaaaaaggtgcaggaaaaaatcgcctttcgcgaaaataaattggttcaagaa
tttgtcgacagccgtttcgatgctttacgggcatttgtgaatggtgagccgagtgatggt
ggccgtgacagcaatctttcgattctgcaagggacacaaatgagccgagttatcggcgca
ttaaacgatcaatatacccgtttggtggtactcaatagtgcgtttgaatatggcgatatt
cctccgatgtctaatggcggagagcgcatggcgattgagtcgcaaacttggccagacccg
tttagcaatattattgcacctttattaaccggttcttcgcagaaattcgaaaataaagtg
attagccaaacctcgaaagcgattgataccgggataggcgaaatctgtcgcaatactttg
caagggcgttatccctttgcagatagtaaaaaagtcgtcagtttgaatgaatttgagcgc
ttctttggtgctaatggcactgtggatagttatttcaagaaaaacctagaaagcaaagtt
gataccacgacgacaccttggcgatataaaggcagcgcaagtagtgaaggccttgaattc
tttgaacaggcagcccttatcaaagatgcattatttaatggcaatgaaggcagaaaagtg
gctttagacttttccgtctctgtccgttatttagcaccttcgataacgcagcttattatg
aatttcgatggcaatgttgtgcgttattcccatggcccaatcaccccctcattctttaaa
tggccgggtattcgtcagggaacgatggtgagtttaacggctcagcgtcaagaagcatcg
gcgatgcctgacattatgttgcgtgggccatgggcaatactgaaatgggccgatatggcg
catgaagtagagcaagatgctgatggtacgcagcgcctgacatttttaatgggcaaagac
cgcgttgaactagaagtttcaggtttaacttatggcaatgaaagtattagcgaactgctt
agaggtttccaatgcccaagtgcagtgaatgataacactaatgaaatttggtga

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