KEGG   Yersinia hibernica CFS1934: D5F51_16625
Entry
D5F51_16625       CDS       T05961                                 
Symbol
tssC
Name
(GenBank) type VI secretion system contractile sheath large subunit
  KO
K11900  type VI secretion system protein ImpC
Organism
yhi  Yersinia hibernica CFS1934
Brite
KEGG Orthology (KO) [BR:yhi00001]
 09180 Brite Hierarchies
  09183 Protein families: signaling and cellular processes
   02044 Secretion system [BR:yhi02044]
    D5F51_16625 (tssC)
Secretion system [BR:yhi02044]
 Type VI secretion system
  Imp/Vas secretion system core components
   D5F51_16625 (tssC)
SSDB
Motif
Pfam: VipB VipB_2 Sey1_3HB
Other DBs
NCBI-ProteinID: QAX80024
UniProt: A0ABX5R3M7
LinkDB
Position
complement(3514010..3515512)
AA seq 500 aa
MSTLEAKNKSASVATATEYSDFNSLLTKEFKAKSEQTKAAVEGAVKTLAEQALANSVTVS
DDAYKSIASIIAEIDSKLSEQINLILHHQEFQSLESAWRGLHYLVNNTETDEKLRLRFLD
ISKDELRRNMKRYKGVAWDQSPLFKKVYEEEYGQLGGEPYGCLVADYYFDHTAPDVDLLA
SIGKVAASAHVPFITGAAPSVLQMESWQELSNPRDLTKIFTQNLEYAAWNSLRQSEDSRY
IGLAMPRFLARLPYGIRTNPVDAFHFEETTDGADHSKYVWSNAAYAMAVNINRSFKEYGW
CTLIRGVESGGVVEGLPCHTFPTDDGGIDIKCPTEIAISDRREAELAKNGFIPLVHRKNT
DYAAFIGAQSLQKPAEYYDADATANANLSARLPYLFACSRFAHYLKCIVRDKIGTFKERD
EMQRWLNDWVMNYVDGDPANSSIETKARRPLAAAEVIVEDVEGNPGYYQAKFFLRPHFQL
EGLTVSLRMVAKLPSLKDVA
NT seq 1503 nt   +upstreamnt  +downstreamnt
atgtctactttagaagcaaaaaataaatcagccagcgtagctaccgcgactgaatatagc
gattttaattcgcttttgaccaaagaattcaaagcgaagtctgagcaaaccaaagctgcc
gttgaaggtgctgttaaaacattagcagagcaggcgttggctaactcagtaacagtttca
gacgatgcttataagagcattgcctcgattattgctgaaattgatagcaagttgtccgaa
caaattaatctgattctgcatcatcaggagttccagtctctggaaagtgcatggcgtggt
ctgcactatttagtaaataatactgagactgatgagaagttaagattgcgtttccttgac
atctctaaagatgaattgcgccgtaacatgaagcgttataaaggtgtggcttgggatcag
agtccattattcaaaaaagtatacgaagaagagtatggccaattagggggcgaaccctat
ggttgcctggttgcagactattactttgatcacacagcacctgatgttgatttgctggct
tcaattggtaaggttgccgcttctgcacacgtgccatttattactggtgctgcgccttct
gtactgcaaatggaatcttggcaggagttatctaatccgcgcgatttaaccaaaatattc
actcagaaccttgaatatgcggcatggaactcactgcgtcagtctgaagactctcgctat
attggtctggctatgccacgtttcttagcacgtttgccatacggcattcgtactaacccg
gtagatgccttccattttgaagagacgactgatggtgctgatcacagcaaatatgtgtgg
tcaaacgcagcttatgcaatggctgttaacatcaaccgttcattcaaagaatacggctgg
tgtaccctgattcgtggtgtggaaagtggtggggtggttgaaggtctaccttgtcataca
ttcccaaccgatgatggcggaattgacataaaatgcccaacagaaattgctatttctgac
cgtcgtgaagcggaactggcaaaaaatggctttattccactagttcacagaaaaaatact
gattacgcggctttcattggtgcgcaatcactgcaaaaaccagcggaatactatgatgct
gatgcgactgcgaacgctaacttgtctgcgcgtctgccgtacctgttcgcctgttcacgt
ttcgcccattatttgaaatgtatcgtgcgcgataaaatcggtactttcaaagagcgtgat
gaaatgcagcgctggttgaatgactgggtaatgaactatgttgatggtgacccggcaaac
tcctccatcgaaactaaagcacgtcgtcctctggccgcggctgaagttattgttgaagat
gttgaaggcaacccaggttattaccaggcgaaattcttcctacgccctcacttccagttg
gaaggtttgactgtgtcactgcgtatggttgctaaattgccttcactgaaagatgttgcg
taa

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