Yersinia hibernica CFS1934: D5F51_17350
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Entry
D5F51_17350 CDS
T05961
Name
(GenBank) exodeoxyribonuclease V subunit gamma
KO
K03583
exodeoxyribonuclease V gamma subunit [EC:
3.1.11.5
]
Organism
yhi
Yersinia hibernica CFS1934
Pathway
yhi03440
Homologous recombination
Brite
KEGG Orthology (KO) [BR:
yhi00001
]
09120 Genetic Information Processing
09124 Replication and repair
03440 Homologous recombination
D5F51_17350
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03400 DNA repair and recombination proteins [BR:
yhi03400
]
D5F51_17350
Enzymes [BR:
yhi01000
]
3. Hydrolases
3.1 Acting on ester bonds
3.1.11 Exodeoxyribonucleases producing 5'-phosphomonoesters
3.1.11.5 exodeoxyribonuclease V
D5F51_17350
DNA repair and recombination proteins [BR:
yhi03400
]
Prokaryotic type
DSBR (double strand breaks repair)
HR (homologous recombination)
RecBC pathway proteins
D5F51_17350
BRITE hierarchy
SSDB
Ortholog
Paralog
GFIT
Motif
Pfam:
Exonuc_V_gamma
RecC_C
Motif
Other DBs
NCBI-ProteinID:
QAX80150
UniProt:
A0ABX5R3E9
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All DBs
Position
complement(3662692..3666081)
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AA seq
1129 aa
AA seq
DB search
MFTVYHSNQLDLLKALTTALIEREPLDNPFQPEIVLVQSPGMAQWLQMQLAQQFSIAANI
EFPLPATFIWDMFTRVLPGIPKESAFSKDAMTWKLMWLLPDLLENPVFSAMKRYLSDDSD
KRKIHQLAARVADLFDQYLVYRPEWLESWERGQPIDNLDDAQQWQALLWVELARYTRQLE
QPEWHRANLYQRFINTLLESDVCPAGLPRRVFICGISALPPIYLQALQALGKHIDIHLMF
TNPCRYFWGDIQDYAFLAKLQSRKRRHYRELMGHESAEVKLFRHPEQAEQLFNADGEQNL
SNPLLASWGRLGRDHMYLLSQVDEIQEVHAFVDIEPDNLLHGIQHDMLELEDGAVIGTTP
ETLAHSHQKRVLALTDRSLSLHVCHSPQREVEVLQDNLLRLLAADPELTPRDIIVMVADI
DSYTPYIQATFGNATGARYLPFAISDRKASQAHPALQAFITLLDLPQSRFTSEQVLALLE
VPALANKFGVTEDGLRRLRQWVGESGIRWGLDDDNVRELSLPATGQHTWHFGITRMLLGY
AMDSSAGDWQGVLPYDESSGLAAELAGQLADMLMQLSQWRQQLSEARTLSEWLPLCRHLL
DSFFEPDNETEAVLVLIEQQWQKVISYGLAAQYPDIVPLNLLRDELASRLDNERISQRFL
AGSINFCTLMPMRSIPFKVVCLLGMNDGVYPRTLPPLGFDLMAKQVRRGDRSRRDDDRYL
FLEALLSAQQQLYISYIGRSIQDNSQRYCSVLVSELIEYISQSYHLPGDEELSADDSANR
VIHHLLCWHARMPFAAENFIPNSELQSYAAEWLPSAESKGVAHPEFNQPLPPEQVAEITL
DELIRFYRHPVRAFFQLRLGVNFVIEETELPDEEPFTVDNLNRYQFNTQLLNALIEESDI
NTVFTRARAAGNLPYGSFGEIYWESQQEEMVPLAERIRAERQENQSLELNIEFGDITLTG
WIHQIQEDGLIRWRPAALTAVDGLLLWIEHLVYCAAGGKGESRMYGRKGTEWRYAPLECD
EARQYFQQLISGYQQGMCEPLLLLSKSGWAWLSQCFDSNSGQILWDDETQTKARMKLLQV
WQGDQRIAGECEDHYIQRVFRLMDNQHLDMILHETQRYLLPIARHNKAS
NT seq
3390 nt
NT seq
+upstream
nt +downstream
nt
atgtttacggtttatcattctaatcaattggatttactcaaagcgctcacgacggcgctg
atagaacgagaaccgttggataaccctttccagccagaaattgtgctagttcaaagccct
ggtatggcccagtggctccaaatgcaattggctcaacaatttagcattgcggctaatatt
gagtttccactgcctgcgactttcatctgggatatgtttacccgagtattaccggggatc
ccgaaagaaagtgcttttagcaaagatgccatgacatggaaactcatgtggttactgccg
gacttattagaaaacccggtattctctgccatgaaacgctatttaagtgacgatagtgat
aaacgtaaaattcaccaacttgctgcccgggtagctgacctttttgaccaatatctggta
tatcgcccggaatggctcgagagttgggagcgtggtcaaccgattgataatcttgatgat
gcccagcagtggcaagctttgttatgggttgaactggcgcgctatacccgccagctagaa
caaccggaatggcatcgcgccaatctttatcagcgttttattaacacactactcgaatcg
gatgtttgtccagcagggttgcctagacgggtctttatttgtggtatatccgcattaccc
cctatctatttacaggcattgcaagcgctgggtaaacatattgatattcacctgatgttt
actaatccatgccgttatttctggggtgacattcaggactatgcttttctggctaaattg
caaagccgtaaacgcagacattaccgcgaattgatgggccatgagtcggcggaagtaaaa
ctgtttcgccacccagaacaagcagaacagctatttaatgctgatggtgagcaaaacctc
agtaatccgctgttagcctcatgggggcggcttgggcgtgaccatatgtatttattatct
caggttgatgagattcaagaggttcatgcttttgttgatattgagccggataacctttta
catggcattcagcacgacatgttggagctggaagatggcgctgttattggcaccacacca
gaaaccttagcgcatagccatcaaaagcgtgtattggcgctaacagaccgctctttgagc
ttgcatgtgtgccatagcccgcaacgcgaagttgaagtcttacaagataatcttctgagg
ctattggcggctgatccggaattgaccccacgtgacattattgtgatggtcgcggacatt
gacagttacactccctatattcaggccacatttggcaatgccaccggggctcgctatttg
ccatttgcgatttcagaccggaaagccagccaggctcatcccgcacttcaagcttttatt
acgctactggatttacctcagagccgctttacttcggaacaggtgttagctctgctggag
gtgcctgctctagccaataaatttggtgttactgaagacggattgcgccgtttacggcaa
tgggtgggcgagtctggcattcgttggggattagatgatgataatgtgcgggagttatct
ttgcctgcgacgggtcagcatacctggcactttggtatcacccgaatgttacttggctat
gcaatggacagtagcgccggtgactggcagggggtacttccttatgatgaatccagtggt
ttagctgctgaacttgctggtcaattggctgatatgttgatgcaactgagccaatggcga
caacaattaagtgaagctcgcacactaagcgaatggttgccattatgccgccacttatta
gatagcttctttgagccagataatgagacggaggcggtattggtgctgattgaacagcaa
tggcagaaagttatcagctatggccttgctgcccaatatccggatatcgtgccacttaat
ttgttacgcgatgagctggcttcgcgcttagataacgagcgcattagccagcgctttctg
gctgggtctattaatttttgtaccttgatgccaatgcgttccattccatttaaagtagtg
tgcttgttggggatgaatgacggtgtttatccccgaactttgcccccactgggctttgat
ttaatggcaaagcaggttcgccgtggtgaccgtagccgccgtgatgatgaccgttatcta
ttcttggaggcattactctccgcccagcaacagctttacatcagctatattgggcgctca
atccaagataacagtcaacgctactgctccgtgctggtgagtgagttgattgaatacatt
tcacaaagttatcacttaccgggcgacgaggaactcagtgcggatgacagcgccaaccgg
gtcatacaccatttgctatgctggcatgcccgtatgccgtttgcagcggaaaactttatc
cctaatagcgagttacagagttacgccgctgaatggctaccctcagcggagtccaagggg
gtggctcatcccgagtttaatcagcctttaccacctgaacaggtggcagaaattactctt
gatgaattaattcgcttctatcgccacccggtgagagcattctttcaattacggcttggg
gtcaattttgttattgaagaaaccgagttaccggatgaagaaccttttaccgtagataac
ctcaatcgttatcagtttaatactcaactattgaatgcattgatagaagagagtgatatc
aatacggtattcacccgcgcccgtgctgcgggcaatcttccatatggttcttttggtgag
atttactgggaaagccaacaagaggaaatggtgccgttagctgaacggatccgtgcagag
cgtcaagaaaatcaaagtcttgaactcaatattgaatttggtgatatcactcttacggga
tggattcatcagattcaagaggatggtttaattcgttggcggcctgcggcattaacagca
gtcgatgggcttttattgtggattgaacatttagtgtattgcgccgcaggtggtaagggt
gaaagccgaatgtatggccgtaaaggaacggaatggcgctacgccccattggaatgtgac
gaagcacggcaatattttcagcagctaatcagtggatatcagcaaggtatgtgcgaacct
ctgctactgttgagtaaaagtggttgggcgtggttgagtcagtgttttgatagtaattct
ggccagattttatgggatgacgaaacccaaactaaggcccgaatgaaactattacaggtt
tggcaaggtgatcaacggatcgctggagagtgcgaggatcactacatacaaagggtgttc
cgcctgatggataaccaacatctcgacatgatattacacgaaactcaacgttatttatta
ccaatagcccgccataataaagcgagctaa
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