Yersinia hibernica CFS1934: D5F51_17990
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Entry
D5F51_17990 CDS
T05961
Name
(GenBank) hypothetical protein
KO
K03657
ATP-dependent DNA helicase UvrD/PcrA [EC:
5.6.2.4
]
Organism
yhi
Yersinia hibernica CFS1934
Pathway
yhi03420
Nucleotide excision repair
yhi03430
Mismatch repair
Brite
KEGG Orthology (KO) [BR:
yhi00001
]
09120 Genetic Information Processing
09124 Replication and repair
03420 Nucleotide excision repair
D5F51_17990
03430 Mismatch repair
D5F51_17990
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03400 DNA repair and recombination proteins [BR:
yhi03400
]
D5F51_17990
Enzymes [BR:
yhi01000
]
5. Isomerases
5.6 Isomerases altering macromolecular conformation
5.6.2 Enzymes altering nucleic acid conformation
5.6.2.4 DNA 3'-5' helicase
D5F51_17990
DNA repair and recombination proteins [BR:
yhi03400
]
Prokaryotic type
SSBR (single strand breaks repair)
NER (nucleotide excision repair)
GGR (global genome repair) factors
D5F51_17990
MMR (mismatch excision repair)
Other MMR factors
D5F51_17990
BRITE hierarchy
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
UvrD-helicase
AAA_19
Viral_helicase1
UvrD_C
TK
AAA_25
Motif
Other DBs
NCBI-ProteinID:
QAX80259
LinkDB
All DBs
Position
complement(3794869..3796008)
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AA seq
379 aa
AA seq
DB search
MNKVIIASAGAGKSTFVVREALKMVTSGKRVLITTFTEACRDEINVKITKENGCVPPNLY
VITWFSFLIKHWIKPYQGCLFDYDVKGMILCSSKSGERPYKVAGRTIYWGEKDFRLHYFS
ADFKVYSDKMAKLSLRCDEKSGGKVIARLAACFDEIYVDEVQDLAGYDLEILQKLFRSPI
KITLVGDPRQATYSTVNTEKNAKYKKAAIVNFFDDKAAGVTVDGKMLNENFRCFHEINDF
ANKLYPYFTPSISNVRGLSGHDGIFLLPEKLLNHYLEAFTPIQLRWDKRRSVDERYPVFT
FGTSKGLTFERVVIYPTKPMLQWFQDNSAALTNDTRAKLYVGLTRPVKSVAIVFDESAAF
KSNGINIYAKLAVPGHCDN
NT seq
1140 nt
NT seq
+upstream
nt +downstream
nt
atgaacaaagtcatcatcgcttctgcaggagcaggtaaaagcacctttgtggtccgtgaa
gcattaaagatggttacctcgggaaagcgtgtgttgattaccacgttcaccgaagcctgc
cgggatgagatcaatgtcaaaatcactaaagagaatggatgtgttccgcctaatttatat
gtcatcacctggttttcctttctgattaaacactggatcaaaccttatcagggatgttta
tttgactatgatgtcaaaggcatgatcctttgcagcagcaaatccggtgaaaggccttat
aaggtagctgggagaaccatctactggggggagaaagatttcagactgcactatttcagc
gctgattttaaggtttactccgataaaatggccaagctctctcttcgctgtgatgaaaag
tcaggcggaaaggtcatcgcccggctggctgcatgttttgatgagatttatgtggatgag
gttcaggacctggccggttacgatcttgaaattcttcaaaaactgttcaggtcacccatt
aaaattacactggtcggggatccgcggcaggcgacttacagcaccgtcaataccgaaaaa
aatgcgaagtacaaaaaagcggccatcgtgaatttctttgatgacaaggcggcaggggtc
acggtcgatggaaaaatgctgaatgagaactttcggtgcttccatgaaatcaatgatttt
gccaacaaactttatccatacttcacaccatcaatctctaacgtacggggcctttctgga
catgatggcatttttctgctgcctgaaaagctcctgaaccattatctggaagcgtttact
cccattcagcttcgctgggataagagacgatctgtagatgaacgttatccggtctttacc
tttggaacatctaaaggcctgacatttgaacgtgtggtcatctatccgaccaaacccatg
cttcagtggtttcaggataactctgctgctctcaccaatgatacgcgcgcaaaattgtat
gtcggcctgactagacctgttaaaagtgttgcgattgtttttgatgaaagtgcggctttc
aaatcgaacgggattaatatttacgctaaattagccgtgccaggccattgcgataactga
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