KEGG   Yersinia hibernica CFS1934: D5F51_18600
Entry
D5F51_18600       CDS       T05961                                 
Symbol
tssC
Name
(GenBank) type VI secretion system contractile sheath large subunit
  KO
K11900  type VI secretion system protein ImpC
Organism
yhi  Yersinia hibernica CFS1934
Brite
KEGG Orthology (KO) [BR:yhi00001]
 09180 Brite Hierarchies
  09183 Protein families: signaling and cellular processes
   02044 Secretion system [BR:yhi02044]
    D5F51_18600 (tssC)
Secretion system [BR:yhi02044]
 Type VI secretion system
  Imp/Vas secretion system core components
   D5F51_18600 (tssC)
SSDB
Motif
Pfam: VipB VipB_2 ConA_BAM2
Other DBs
NCBI-ProteinID: QAX80365
UniProt: A0ABX5R3Y4
LinkDB
Position
complement(3930360..3931913)
AA seq 517 aa
MLMSVQENTAQGSATTVLEKNSAVAQGVYASLFEKINLNPVSSLAGIDAFQNSDALADAT
TDERVTAAVSVFLDLLKQSSKKVEKLDKTLLDGHIAALDDQISRQLDAVMHHADFQRVES
TWRGVKSLIDQTDFRQNVRIELLDISKDHLVQDFEDAPEIVQSGLYTQTYIQEYDTPGGE
PIAAAISNYEFDRSPQDIALLRNISKVAAAAHMPFIGSVGPEFFGKENMEEVAAIKDIGN
YFDRAEYIKWKAFRDSDDSRYIGLTMPRVLGRLPYGPDTVPVRSFNYVEEVKGPDHERYL
WTNAAFAFAANMVKSFIKNGWCVQIRGPQAGGAVTNLPIHLYDLGTGNQVKIPSEVMIPE
TREFEFANLGFIPLSYYKNRDYSCFFSANSAQKPALYDTADATANSRINARLPYIFLLSR
IAHYLKLIQRENIGTTKDRRLLELELNNWIRTLVTEMTDPGDDLQASHPLRDAKVTVEDI
EDNPGFFRVKLYAVPHFQVEGMDVNLSLVSQMPKAKA
NT seq 1554 nt   +upstreamnt  +downstreamnt
atgctgatgtctgtacaggaaaacactgcgcagggtagtgcgacgaccgtattagagaaa
aatagtgctgtagctcaaggggtttatgcctctttgtttgaaaaaatcaacctgaatcca
gtctcctcactggccggtattgatgctttccaaaacagtgatgccttggctgatgcaacc
actgacgagcgcgtcactgcggctgttagtgtctttctagacctactgaagcagtcgtca
aaaaaagtggaaaagctggataaaacattgctggatggccatattgccgcactggatgac
caaatcagccgtcagttggatgcggtgatgcaccacgccgatttccagcgtgtggaatct
acctggcgtggtgtgaaatcccttattgatcaaactgatttccgtcaaaacgtgcgcatt
gaactgctggatattagtaaagaccatctggtgcaggattttgaagacgccccagaaatt
gtacaaagcggcctctacacccagacttatattcaggaatacgacacccccggcggcgag
cctattgccgcagccatctccaactacgagttcgaccgtagcccgcaggatatcgcgctg
ctgcgcaatatttccaaggttgcggcggcggcccatatgccgtttatcggttccgttggc
ccagaattctttggcaaagagaacatggaagaagtggctgccatcaaagatatcggcaac
tactttgaccgcgcagaatacattaagtggaaagctttccgcgactcggatgattcccgc
tatattggcctgactatgccgcgtgtattaggtcgtttgccatatggccctgatacggtg
ccggtacgcagttttaactatgttgaagaagtgaaaggcccggatcacgagcgctacttg
tggaccaatgccgcgtttgcttttgctgccaatatggtgaaaagctttatcaaaaatggc
tggtgtgtgcagattcgtggcccacaagccggtggcgcggtgactaacttgcctatccac
ctgtatgatttgggtaccggtaatcaggtcaaaatcccgtcagaagtgatgatcccagaa
acgcgtgagtttgagttcgctaatttgggctttatcccgctgtcttactataaaaaccgt
gattactcctgcttcttctccgctaactcggctcagaaacctgcgctgtatgacactgca
gatgccactgctaacagccgtattaatgcccgtttgccgtatattttcctactgtcacgc
attgcccattacctgaagctaatccaacgcgaaaatatcggcaccaccaaagaccgccgt
ctgttggagttggagctgaataactggatccgcacactggtgaccgaaatgactgatccg
ggtgatgatttacaggcttctcatccactgcgcgatgcaaaagtgacagtcgaagatatc
gaagacaaccccggtttcttccgcgtcaaactgtatgccgtgccgcacttccaggtggaa
ggtatggatgtgaatctgtcgctagtttcgcagatgccaaaggctaaagcataa

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