Yersinia hibernica CFS1934: D5F51_19960 Help Entry D5F51_19960       CDS       T05961                                  Name (GenBank) RNA polymerase factor sigma-54   KO K03092   RNA polymerase sigma-54 factor Organism yhi  Yersinia hibernica CFS1934 Pathway yhi02020   Two-component system yhi02040   Flagellar assembly Brite KEGG Orthology (KO) [BR:yhi00001]  09130 Environmental Information Processing   09132 Signal transduction    02020 Two-component system     D5F51_19960  09140 Cellular Processes   09145 Cellular community - prokaryotes    05111 Biofilm formation - Vibrio cholerae     D5F51_19960   09142 Cell motility    02040 Flagellar assembly     D5F51_19960  09180 Brite Hierarchies   09182 Protein families: genetic information processing    03021 Transcription machinery [BR:yhi03021]     D5F51_19960 Transcription machinery [BR:yhi03021]  Prokaryotic type   Bacterial type    RNA polymerase     Sigma factors      D5F51_19960 SSDB OrthologParalogGFIT Motif Pfam:  Sigma54_DBD Sigma54_CBD Sigma54_AID Motif Other DBs NCBI-ProteinID:  QAX80596 UniProt:  A0ABX5R5F4 LinkDB All DBs Position 4224362..4225795 Genome browser AA seq 477 aa AA seqDB search MKQGLQLKFSQQLAMTPQLQQAIRLLQLSTLELQQEIQLALESNPLLEQTDLHEEIEAKK TVDSESLDTREALEQKDMPEELPLDATWDEIYTAGTPSGMRNDYSDDELPVYQGETTQTL QDYLMWQVDLTPFSETDAAIATSIVDAVDETGYLTVPLEDILESMGDENIALDEVEAVLK RIQHFDPIGVAARNLRECLLVQLSQYAKDTPYLAEARLVISDYLDLLGNHDFRTMIRLSR LKEDTLKEAIALIQSLDPRPGQSINIGESEYVIPDVLVRKDKGHWTVELNADSIPRLKIN QQYAAMGNTTRNDSDGQFIRSNLQEAKWLIKSLESRNETLLKVARCIVEQQVAFFENGPE FMKPMVLADIAQAVDMHESTISRVTTQKFLHSPRGIFELKYFFSSHVNTDSGGEASSTAI RALVKKLVAAENPAKPLSDSKLTTLLCEQGIMVARRTVAKYRESLSIPPSNQRKQLV NT seq 1434 nt NT seq  +upstreamnt  +downstreamnt atgaagcaaggtttgcaactcaagtttagccaacaactggccatgactccgcagctacag caggcgattcgcctgttgcagctttctacgctagaactccagcaggagattcagttagcg ctggagagcaacccgctgctagagcaaactgatcttcatgaagagatagaggccaaaaaa acggtcgacagtgaatcgctcgacactcgcgaagcactggaacaaaaagatatgccggaa gagttgccgctcgatgccacctgggatgaaatttacaccgccggtacgccatcgggcatg cgcaatgattacagtgacgatgagctgccggtctatcagggggaaaccacccaaacactg caagattatctgatgtggcaagtggacttaacacccttttccgaaaccgatgccgcgatt gcgacctccatcgtcgatgctgttgatgaaactggctatcttactgtgccgctagaagac attctggaaagcatgggcgatgaaaacatcgcactggacgaagttgaagccgtactcaaa cgaattcaacactttgatcctattggtgttgctgctcgcaatttgcgcgaatgtttattg gtgcagctgtcgcaatatgctaaagataccccctatcttgccgaagcacgtttggttatt agtgattatctggatttgctaggcaaccatgatttccgcacgatgatccgtttaagtcgg ctaaaagaagatacacttaaagaagccattgctctgattcagtcactcgacccacgccct ggtcaatctattaatatcggggagtctgagtacgtcattcccgatgttttggttcgtaaa gacaaagggcactggacggtcgagctgaatgccgatagcattccgcgcctgaaaattaat cagcaatatgcagcaatgggaaacactacccgcaatgatagcgatgggcagtttatccgc agtaatctacaagaagcaaaatggttgataaaaagccttgagagccgcaatgaaacgctg ctgaaagtggcacgttgcattgtcgagcagcaagtggccttttttgagaatgggcctgaa tttatgaaacccatggtgctggcagatatcgcccaagccgtggatatgcatgaatcgaca atttcccgtgtgaccacgcagaaattcctgcacagtcctcggggcattttcgagctgaaa tatttcttctccagtcacgtcaatacagatagcgggggtgaagcttcttctactgccatc cgtgcactggtgaaaaaattggttgcggcagaaaaccctgccaaaccccttagcgacagt aagctgaccacactattatgtgaacaaggcattatggtggcacggcgtaccgtcgcgaag taccgagagtcgttatccatcccgccgtcaaatcaacgtaaacagttggtttga

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