Yersinia hibernica CFS1934: D5F51_20940
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Entry
D5F51_20940 CDS
T05961
Name
(GenBank) DUF853 family protein
KO
K06915
DNA double-strand break repair helicase HerA and related ATPase
Organism
yhi
Yersinia hibernica CFS1934
Brite
KEGG Orthology (KO) [BR:
yhi00001
]
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03400 DNA repair and recombination proteins [BR:
yhi03400
]
D5F51_20940
DNA repair and recombination proteins [BR:
yhi03400
]
Prokaryotic type
DSBR (double strand breaks repair)
HR (homologous recombination)
Archaeal homologous recombinant proteins
D5F51_20940
BRITE hierarchy
SSDB
Ortholog
Paralog
GFIT
Motif
Pfam:
HerA_C
DUF87
AAA_22
ResIII
AAA_10
T2SSE
SLFN-g3_helicase
TrwB_AAD_bind
FtsK_SpoIIIE
AAA_19
AAA_30
AAA_7
AAA_16
nSTAND_NTPase5
Hydrolase
DEAD
CbiA
SRP54
AAA_28
AAA_25
P-loop_TraG
bpMoxR
AAA_11
AAA_6
nSTAND3
Motif
Other DBs
NCBI-ProteinID:
QAX80772
UniProt:
A0ABX5R540
LinkDB
All DBs
Position
complement(4412239..4413750)
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AA seq
503 aa
AA seq
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MSEALLIAKAQPAQDLVILSALANRHGLITGATGTGKTVTLQKMAEQFSRIGVPVFLADV
KGDLSGIGALGVESEKLQTRLAAIGVTDWQPQACPIVPWDIFAEKGHPIRATISDLGPLL
LGRLLDLNEVQSGVLQLVFKIADDNNLLLLDMKDLRAIVQYVGDNAKQFRTQYGNITPAS
VGAIQRGLLTLEEQGANQFFGEPMLDIHDLMRIDSNGQGIINLLAADRLINQPKLYAIFL
LWLLAELFEQLPEVGDVDKPKLVFFFDEAHLLFTDAPSALVDKVEQVVRLIRSKGVGIYF
VTQNPLDIPDKILGQLGNRVQHALRAFTPRDQKAVKSAAQTLRANPAFSAEQVITELGVG
EALISFLDEKGRPNIVERAMVIAPQSKMGALDAAARNHAINHSPLYGRYEEMVDRESAYE
TLSAGGSSTLGDEAAGGAATPEPPNSHGGGLMDGLNDLLFGSTGPRGGKRDGIVQTAAKS
MARDLGRQILRGVLGSITGGRKR
NT seq
1512 nt
NT seq
+upstream
nt +downstream
nt
atgagtgaagcattgcttatcgcaaaggcgcagccggcacaggatttagtcattttatcg
gcgctggcaaaccgccatggtttaattaccggcgcgaccggaacgggcaaaacggtcaca
ctacaaaaaatggccgagcaattttctcgcattggtgtcccggtatttctggctgatgtc
aaaggcgatttatccgggattggtgctctgggggttgaatccgaaaagctgcaaaccagg
ttggcggcgatcggggtcactgactggcagccccaagcatgccccattgtcccttgggat
atttttgctgaaaaaggccaccccatccgagccactatttctgatcttggcccactgctg
ctggggcgcttacttgatctcaatgaagtacaaagtggtgtgctgcaattggtctttaaa
attgcggacgacaacaatttgctgttgctggacatgaaagatttgcgcgccattgtgcaa
tatgtcggcgacaatgctaagcagttccgcacgcaatacggcaatatcacgcccgcctcg
gtaggggccatccagcgcggtttactgaccttggaagagcagggagcgaatcaattcttt
ggtgaaccaatgctggatattcacgatttgatgcggattgacagcaatgggcaaggtatt
atcaacctgctggctgcggatcggctgattaatcagcccaaactctatgccattttcctg
ctgtggttgttggccgaacttttcgagcaattgccggaagtcggcgatgttgataaaccg
aaattggtcttcttctttgatgaagcccatttactgtttactgatgcgccgagcgcgctg
gtggataaagttgagcaagtggtgcggctgattcgctcaaaaggggttggcatctatttt
gtgacacaaaacccgttagatattccggataagatcctcggccaactgggcaatcgggtg
cagcatgctttacgcgcttttaccccacgggatcaaaaagcggttaaatcggccgcgcaa
accctgcgcgcgaacccggcattcagtgctgagcaagtgattactgagctgggagtgggt
gaggcactcatttctttccttgatgagaaagggcggcccaatattgtggagcgcgccatg
gtgattgctccgcaatccaaaatgggggcgttggatgctgcggcacgtaatcacgccatc
aatcattcgccgctgtatggccgctacgaagagatggtcgaccgagaatcggcctatgag
acattatctgctggcggctcctcgaccttgggggacgaggcggcaggcggggcggcaaca
ccagagccgccaaatagccatggcggtggactgatggatgggctgaatgatttgctcttt
ggttctaccggcccgcgtgggggtaaacgcgatggtattgtgcagactgcggccaaaagt
atggcgcgtgacctgggtcgacaaattttgcgcggggttctgggctcgattaccggtggg
cgtaagcgctaa
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