Yersinia hibernica CFS1934: D5F51_21000
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Entry
D5F51_21000 CDS
T05961
Symbol
trpS
Name
(GenBank) tryptophan--tRNA ligase
KO
K01867
tryptophanyl-tRNA synthetase [EC:
6.1.1.2
]
Organism
yhi
Yersinia hibernica CFS1934
Pathway
yhi00970
Aminoacyl-tRNA biosynthesis
Brite
KEGG Orthology (KO) [BR:
yhi00001
]
09120 Genetic Information Processing
09122 Translation
00970 Aminoacyl-tRNA biosynthesis
D5F51_21000 (trpS)
09180 Brite Hierarchies
09181 Protein families: metabolism
01007 Amino acid related enzymes [BR:
yhi01007
]
D5F51_21000 (trpS)
09182 Protein families: genetic information processing
03016 Transfer RNA biogenesis [BR:
yhi03016
]
D5F51_21000 (trpS)
Enzymes [BR:
yhi01000
]
6. Ligases
6.1 Forming carbon-oxygen bonds
6.1.1 Ligases forming aminoacyl-tRNA and related compounds
6.1.1.2 tryptophan---tRNA ligase
D5F51_21000 (trpS)
Amino acid related enzymes [BR:
yhi01007
]
Aminoacyl-tRNA synthetase
Class I (G)
D5F51_21000 (trpS)
Transfer RNA biogenesis [BR:
yhi03016
]
Eukaryotic type
Aminoacyl-tRNA synthetases (AARSs)
Other AARSs
D5F51_21000 (trpS)
Prokaryotic type
D5F51_21000 (trpS)
BRITE hierarchy
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
tRNA-synt_1b
DUF3086
Motif
Other DBs
NCBI-ProteinID:
QAX80783
UniProt:
A0ABX5R5H4
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All DBs
Position
complement(4428448..4429491)
Genome browser
AA seq
347 aa
AA seq
DB search
MSKPTALTAVSDNPIKPIVFSGAQPSGELTIGNYMGALRQWVQMQDDYDCIYCIVDLHAI
TARQDPALLRKRTLDTLALYLACGIDPQKSTIFVQSHVPEHSQLGWALNCYTYFGELSRM
TQFKDKSARYAENINAGLFDYPVLMAADILLYQTHQVPVGEDQKQHLELSRDIASRFNNL
YGDIFKIPEPFIPKAGARVMSLQDPTKKMSKSDDNRNNVIELLEDPKSVVKKIKRAMTDS
DEPAVIRYDTEKKAGVSNLLDILSGVTGQSIAELEAQFAGQMYGHLKGAVADAVSGMLSE
LQTRYHQYRQDEVFLQEVMREGAAKARGRAQETLAKVYDAIGFVTHP
NT seq
1044 nt
NT seq
+upstream
nt +downstream
nt
atgagtaaacccactgcattaacggctgtatccgataacccaataaaacctatcgtattt
agcggcgcgcaaccgtccggcgaattgactattggtaattacatgggtgcgctgcgtcag
tgggtacagatgcaagatgattatgattgcatctattgcattgttgacctgcatgcgatt
actgctcgtcaagaccccgcgctgttacgtaaaagaacgctggacaccttagcgctgtat
ctggcttgtggtattgatccgcagaaaagcaccatttttgttcaatcccatgtaccagag
cactcccaactgggctgggcgctgaactgctacacctatttcggcgaactaagccgcatg
actcagttcaaggacaaatccgcccgctatgctgaaaatattaacgccggtttgttcgac
tacccggtattgatggccgcagatattttgctgtaccagacccatcaggtgcccgtgggg
gaagatcaaaagcaacatctggaattgagtcgcgatattgccagccgcttcaataacttg
tacggtgatatcttcaaaatccctgagccatttattcctaaagccggtgcacgggttatg
tctttgcaggatccaaccaaaaagatgtcaaagtcagatgacaaccgcaataacgtcatc
gaattattggaagaccctaaatctgtcgtgaaaaagattaaacgcgcgatgacagattct
gacgaacccgcggttatccgatatgacaccgaaaagaaagccggtgtttctaacctgctg
gatattctctctggcgtcacgggccagtctattgcggagctggaagcccagtttgccggc
caaatgtacggccacttgaaaggggcggttgccgatgcggtgtctggcatgctgagtgag
ctgcaaacgcgctatcaccaatatcgtcaagacgaagttttcttgcaggaagtgatgcgc
gaaggggccgctaaggcgcgtggtcgtgcgcaagaaacactggcaaaagtgtatgacgcg
attggttttgttacccatccataa
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