Yinghuangia sp. ASG 101: LO772_00965
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Entry
LO772_00965 CDS
T07749
Symbol
dnaE
Name
(GenBank) DNA polymerase III subunit alpha
KO
K02337
DNA polymerase III subunit alpha [EC:
2.7.7.7
]
Organism
yia
Yinghuangia sp. ASG 101
Pathway
yia03030
DNA replication
yia03430
Mismatch repair
yia03440
Homologous recombination
Brite
KEGG Orthology (KO) [BR:
yia00001
]
09120 Genetic Information Processing
09124 Replication and repair
03030 DNA replication
LO772_00965 (dnaE)
03430 Mismatch repair
LO772_00965 (dnaE)
03440 Homologous recombination
LO772_00965 (dnaE)
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03032 DNA replication proteins [BR:
yia03032
]
LO772_00965 (dnaE)
03400 DNA repair and recombination proteins [BR:
yia03400
]
LO772_00965 (dnaE)
Enzymes [BR:
yia01000
]
2. Transferases
2.7 Transferring phosphorus-containing groups
2.7.7 Nucleotidyltransferases
2.7.7.7 DNA-directed DNA polymerase
LO772_00965 (dnaE)
DNA replication proteins [BR:
yia03032
]
Prokaryotic type
DNA Replication Elongation Factors
Elongation factors (bacterial)
DNA polymerase III holoenzyme
LO772_00965 (dnaE)
DNA repair and recombination proteins [BR:
yia03400
]
Prokaryotic type
SSBR (single strand breaks repair)
MMR (mismatch excision repair)
DNA polymerase III holoenzyme
LO772_00965 (dnaE)
BRITE hierarchy
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
DNA_pol3_alpha
DNA_pol3_finger
PHP
HHH_6
tRNA_anti-codon
RNA_pol_I_A49
tRNA_anti_2
Motif
Other DBs
NCBI-ProteinID:
UGQ12214
LinkDB
All DBs
Position
complement(202308..205910)
Genome browser
AA seq
1200 aa
AA seq
DB search
MSDSFVHLHNHTEYSMLDGAQKLAPMFAEAARQGMPAIAMSDHGNMFGAYEFAQVARGFG
DVKPIIGIEAYVAPSSRFARQREFWGTGGRRASGDDGEGSKDVSGGGRYTHMTMWAHNAQ
GLRNLFRLSTQAGYEGQFPAGKPRMDRELIAERPDGIIATTGCPSGEIQTRLRLDQYDEA
RAAAAAYQEIFGRENYFVELMDHGLDIERTVRDGLLRLAADLAIPLLATNDAHYTTEDQA
DAHDTLLCIGVGRNKDDPNRFRFAGTGYHLKTAADMRDLFAELPRACDNTLLIAERVGPY
DEVFDHVDEMPRFPDGETQESWLRHEVRRGLVRRYGDPIPPHVLERFETEMSVIGPMGFS
SYFLVVADICRHARRTGVPIGPGRGSVTGSIVAYATRITELCPLEHGLLFERFLNPERIN
PPDVDLDFDDRRRDSMVRYVAEKYGEEFTALVNTFGTIKAKNAIKDSARILGYPYAHGER
ITKALPPDQNGKSAPLAAVFDPEHPRYAEAAEIRGMYETEPDVRRVIDTARGVEGMTRGT
GVHAAAVILSKTRLTDRIPLHMRASDGAKITGFDYPSCEAMGLVKMDFLGLRNLGVIDQA
IENIRANRGTDLATVDPGDGGRPTTEVIPLDDAKTYRLLADGNTLGVFQLDSAGMRALLR
LMEPTRFEDIAAANALYRPGPMAANAHTNYALRQNGKQEPTPIHPELADALEPILGSTHH
LLVYQEQIMAIARQLAGYTLGGADMLRRAMGKKKPEVLAAEWERFHGGMRANGYSDDAIQ
AVWDVMLPFSGYAFNKSHTAGYGLVSYWTAYLKANYPAEYLAALLTSVGDDKDKMGVYLA
DARRMGVKVLSPDVNASAVAFTAVGEDVRFGLTAVRNVGTPVAEAVIRARATRGPYASFA
DFLTKAEAVACAKRAVDSLVKAGAFDSLGHTRKALSAVHESAIDAVIGLKRQEEHGQFDL
FGGDRGDPEGGPGSTRPAVGLDFTLGDDEWPRAQLLATEREMLGLYVSGHPLDGAEHILA
RNRDTTIADLLGSGRTDGFAELAGLITAVDRRVNKSGHPWAILTLTDHDASIEVLFFPKN
HSLYAAEFIADNAVAVRGRINERDGALSIFGETLTPLDISAAHHGRPPVVLAIHERRVTP
DMVARLKAVLLAHPGDSEVRVRMAKRRGGTTLMRLGPTVENTPAFASEIKALLGADAWSV
NT seq
3603 nt
NT seq
+upstream
nt +downstream
nt
gtgtccgattccttcgtgcatctgcacaaccatacggagtactccatgctcgacggcgcg
cagaagctggcgccgatgttcgccgaggcggcccgccagggcatgcccgcgatcgcgatg
agcgaccacggaaacatgttcggcgcctacgagttcgcccaggtcgcccgaggcttcggc
gacgtcaaaccgatcatcggcatcgaggcgtacgtcgccccctcctcacgcttcgcccgg
caacgcgagttctggggcaccggcgggcgccgcgcatcgggcgacgacggcgaaggctcg
aaggacgtctccggcggcgggcggtacacccacatgaccatgtgggcgcacaacgcccaa
ggcctgcgcaacctgttccggctcagtacccaggccggctacgaaggccagttccccgcc
gggaaaccgcgcatggaccgcgaactgatcgccgagcgccccgacggcatcatcgccacc
accggctgcccctcgggagagatccagacccggctgcgcctcgaccagtacgacgaggcc
cgagccgccgcagccgcctaccaggagatcttcggccgcgagaactacttcgtcgaactc
atggaccacggcctggacatcgagcgcaccgtccgcgacggcctgctgcgcctcgccgcc
gacctggccatccccctcctggccaccaacgacgcgcactacaccaccgaggaccaggcc
gacgcccacgacaccctgctgtgcatcggcgtcggcaggaacaaggacgaccccaaccgc
ttccgcttcgccggcaccggctaccacctcaagaccgccgccgacatgcgcgacctgttc
gccgagctgccgcgggcctgcgacaacaccctcctgatcgccgagcgcgtcggaccgtac
gacgaagtcttcgaccacgtcgacgagatgccgcgcttccccgacggcgagacccaggag
tcgtggctgcgccacgaggtgcgccgcggtctcgtccggcgctacggcgacccgatcccg
ccgcacgtcctggaacgcttcgagaccgagatgtcggtcatcggcccgatgggcttcagc
tcgtacttcctcgtcgtcgcggacatctgccgccacgcccggcgcaccggcgtcccgatc
ggccccggccgcggctcggtcaccggctcgatcgtcgcgtacgcgacgcgcatcaccgag
ctgtgccccctcgaacacggcctgctgttcgagcggttcctcaaccccgagcgcatcaac
ccgcccgacgtcgacctggacttcgacgaccgccgccgcgacagcatggtccgctacgtc
gccgagaagtacggcgaggagttcaccgccctggtcaacaccttcggcacgatcaaggcc
aagaacgcgatcaaggactccgcgcgcatcctgggctacccgtacgcgcacggcgagcgg
atcaccaaggccctgccacccgaccagaacggcaaatccgccccgctggccgccgtcttc
gaccccgaacacccgcgctacgccgaggccgccgagatccgcggcatgtacgaaaccgag
ccggacgtacggcgcgtgatcgacaccgcccgcggcgtcgagggcatgacgcgcggcacc
ggcgtccacgccgcggccgtcatcctctccaagacccggctgaccgaccgcatccccctg
cacatgcgcgcctccgacggcgcgaagatcaccggattcgactacccgtcgtgcgaggcg
atgggcctggtcaaaatggacttcctgggcctgcgcaacctcggcgtcatcgaccaggcc
atcgagaacatccgcgccaaccgcggcaccgacctggccaccgtcgaccccggcgacggc
gggcgccccaccaccgaggtcatcccactcgacgacgccaagacgtaccgcctgctcgcc
gacggcaacaccctcggcgtcttccaactcgacagcgccggcatgcgcgccctcctgcgg
ctcatggagccgacccgcttcgaggacatcgccgcggccaacgccctctaccggcccggc
ccgatggccgccaacgcccacaccaactacgcgctgcgccagaacggcaagcaggaaccc
accccgatccacccggagttggcggacgccctcgaaccgatcctcggctccacccaccac
ctgctcgtctaccaggagcagatcatggcgatcgcccggcaactcgccggctacacgctc
ggcggcgcggacatgctgcgccgggccatgggcaagaagaaaccggaggtcctggccgcg
gaatgggagagattccacggcggcatgcgcgccaacggctactcggacgacgcgatccag
gcggtgtgggacgtgatgctgccgttctccggctacgcgttcaacaagtcccacaccgcc
gggtacggcctcgtctcgtactggaccgcgtacctcaaggccaactaccccgccgaatac
ctcgcggcgctcctcacctccgtcggcgacgacaaggacaagatgggcgtctacctcgcc
gacgcacggcgcatgggcgtcaaggtgctctcgccggacgtcaacgcctccgccgtcgcg
ttcacggcggtcggcgaggacgtgcggttcggcctcaccgcggtccgcaacgtcggaaca
cctgtcgcggaggcggtcatccgcgcccgcgcgacccggggcccctacgcctcgttcgcc
gacttcctcaccaaagccgaggcggtcgcctgcgccaagcgggccgtcgactcgctggtc
aaggccggggcgttcgactcgctcgggcacacccgcaaggcgctgagcgcggtccacgag
agcgcgatcgacgcggtgatcgggctcaaacgccaggaggaacacggccagttcgacctg
ttcggcggcgaccgcggcgaccccgagggcgggcccggctcgacgcggcccgcggtcggc
ctcgacttcacgctcggcgacgacgaatggccgcgtgcgcaactcctcgccaccgaacgc
gagatgctgggcctgtacgtctccggccacccgctcgacggcgcggagcacatcctcgcc
cggaaccgcgacaccacgatcgccgacctgctcggctccggacgcaccgacggattcgcc
gaactcgccggcctgatcaccgcggtcgaccggcgcgtcaacaagtccggccacccgtgg
gcgatcctcaccctcaccgaccacgacgcgtcgatcgaggtgctgttcttcccgaagaac
cactccctgtacgcggccgagttcattgccgacaacgcggtcgcggtacgcggccggatc
aacgaacgcgacggcgcgctctcgatcttcggcgaaaccctcaccccgctcgacatcagc
gccgcccaccacggccgcccgccggtcgtcctcgcgatccacgaacgccgcgtgaccccc
gacatggtcgcccgcctcaaagcggtgctgctcgcccaccccggagacagcgaggtacgc
gtccgcatggccaaacgacgcggcggcaccaccctcatgcgcctcggcccgaccgtcgag
aacaccccggccttcgcgtccgagatcaaggcccttctgggcgcggacgcgtggtccgtg
tga
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