Yinghuangia sp. ASG 101: LO772_03000
Help
Entry
LO772_03000 CDS
T07749
Name
(GenBank) helix-turn-helix domain-containing protein
KO
K13529
AraC family transcriptional regulator, regulatory protein of adaptative response / DNA-3-methyladenine glycosylase II [EC:
3.2.2.21
]
Organism
yia
Yinghuangia sp. ASG 101
Pathway
yia03410
Base excision repair
Brite
KEGG Orthology (KO) [BR:
yia00001
]
09120 Genetic Information Processing
09124 Replication and repair
03410 Base excision repair
LO772_03000
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03000 Transcription factors [BR:
yia03000
]
LO772_03000
03400 DNA repair and recombination proteins [BR:
yia03400
]
LO772_03000
Enzymes [BR:
yia01000
]
3. Hydrolases
3.2 Glycosylases
3.2.2 Hydrolysing N-glycosyl compounds
3.2.2.21 DNA-3-methyladenine glycosylase II
LO772_03000
Transcription factors [BR:
yia03000
]
Prokaryotic type
Helix-turn-helix
AraC family
LO772_03000
DNA repair and recombination proteins [BR:
yia03400
]
Prokaryotic type
SSBR (single strand breaks repair)
BER (base exicision repair)
DNA glycosylases
LO772_03000
BRITE hierarchy
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
AlkA_N
Ada_Zn_binding
HTH_18
HhH-GPD
HTH_AraC
HHH
Motif
Other DBs
NCBI-ProteinID:
UGQ12600
LinkDB
All DBs
Position
771411..772934
Genome browser
AA seq
507 aa
AA seq
DB search
MSETFSARYQAISSRDARFDGRFFTAVSSTGIYCRPSCPARTPRPENVTFFATAAAAQAA
GFRACKRCRPEAGPGSPDWDVRADLVGRALRLIADGVVDEGGVGELARRLAVSERHLHRQ
MVGEVGTGPLALARMRRAQTARMLLEATDLPVTRIAFAAGYASVRQFNESMTEAFGCPPT
ALRRRRRPEGPGADGEGDIVLRLQHRRPLAHDPMLDFLAARAIGGVEEVVEAHPAAGPGR
VGPAGTRTYRRSVRLPRRTGIMTVTPHPDAGFATLRLRLEDLRDLTAAVQRCRRLFDLDA
DPQGVDDVLGRDELLGPLVAKRPGLRVPGHVDGFELAVRAVLGQQVTVRGARTLAERLVR
QVGCPLAAPDGTLTHMFPSAEQVAAADLADIGLTGARARALRALAEAVAEGTVVPDPGAD
RDATRHALLALPGIGPWTAAYIAMRALGDPDAVPLTDLGIRHAVRALGADDTPKAITTRA
ETWRPWRAYAAMHLWTHLSETQAPTGG
NT seq
1524 nt
NT seq
+upstream
nt +downstream
nt
gtgagcgagacattcagcgcccggtaccaggccatcagcagccgcgacgcccggttcgac
gggcgcttcttcaccgccgtgtcgagcaccggcatctactgccggccgagctgcccggcc
cggaccccgcggccggagaacgtcacgttcttcgccaccgccgccgcggcgcaggccgcg
gggttccgggcgtgcaagcgctgccgtcccgaggccggccccggctcgccggactgggac
gtccgcgcggacctggtcgggcgcgcgctgcggttgatcgcggacggcgtcgtcgacgag
ggcggcgtgggcgaactggcccgccggctggccgtgtcggaacgccacctgcaccgccag
atggtcggcgaggtggggaccgggccgctcgcactcgcccgcatgcgacgggcgcagacc
gcgcggatgctgctggaggcgacggacctcccggtgacgcggatcgcgttcgcggccggc
tacgcgagcgtgcggcagttcaacgagtcgatgacggaggccttcggctgtccgcccacc
gcactgcggcgacggcggcgccccgagggccccggcgcggacggcgagggcgatatcgtg
ctgcggctccagcaccgcaggccgctggcccacgacccgatgctcgactttctggccgcc
cgggcgatcgggggcgtcgaggaggtggtcgaggcgcatccggccgcggggcccggccgg
gtcggtcccgccgggacccgcacctaccgccggagcgtgcggctcccccgccgcaccggg
atcatgacggtcactccgcatcccgacgcgggcttcgccacgctgcggctgcggctggag
gatctgcgcgacctgaccgccgccgtgcagcgctgccggaggctgttcgatctggacgcc
gatcctcagggagtcgacgacgtgctcggtcgcgacgaactcctcggccccctggtcgcc
aagcgcccggggctgcgcgtccccggccacgtcgacgggttcgagctggcggtacgggcc
gtcctcggtcagcaggtcaccgtgcggggggcgcgcacgctcgccgagcggctggtccgc
caggtgggctgcccgctcgcggcgccggacgggacgctgacgcacatgttcccgagcgcc
gagcaggtcgccgcggccgacctggccgacatcggtctgaccggcgcccgcgcccgtgcg
ctgcgcgcgctggccgaggcggtcgcggaggggacggtcgtgccggacccgggcgccgac
cgcgacgcgacacggcacgcgctgctcgcgctgccgggcatcggcccgtggaccgccgcg
tacatcgcgatgcgcgccctcggcgaccccgacgccgtccccctcaccgacctcggcatc
cgccacgccgtacgcgccctgggcgccgacgacacccccaaggccatcaccacacgcgcc
gaaacgtggcgcccgtggcgagcctacgcggccatgcacttgtggacccacctgtcggaa
acccaagccccgacaggcggataa
DBGET
integrated database retrieval system
