Yinghuangia sp. ASG 101: LO772_04645
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Entry
LO772_04645 CDS
T07749
Name
(GenBank) SigB/SigF/SigG family RNA polymerase sigma factor
KO
K03090
RNA polymerase sigma-B factor
Organism
yia
Yinghuangia sp. ASG 101
Brite
KEGG Orthology (KO) [BR:
yia00001
]
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03021 Transcription machinery [BR:
yia03021
]
LO772_04645
Transcription machinery [BR:
yia03021
]
Prokaryotic type
Bacterial type
RNA polymerase
Sigma factors
LO772_04645
BRITE hierarchy
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Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
Sigma70_r4
Sigma70_r2
Sigma70_r3
Sigma70_r4_2
HTH_23
HTH_Crp_2
Sigma70_ECF
MarR
HTH_3
HTH_Tnp_4
HTH_24
DUF7120
HNF-1_N
HTH_37
Motif
Other DBs
NCBI-ProteinID:
UGQ12912
LinkDB
All DBs
Position
1170304..1171362
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AA seq
352 aa
AA seq
DB search
MPAHSRSASTAPPRAASRQRTAPAPDRTAEKHRTAPHRAPAPSAARPGTGGTDTAHPLPP
GIEAATRYTADELRGMGKYEARALSDTLIRRLRTLAPEAVEYGELRGTIVELNLPLVRYA
AREFGHRREAYEDILQTGIVGLIKAVDAYDVDRGVEFASFALPTISGEIKRFFRDTSWPV
HVARGLQERFLAVTRTSDRLEQKLGREPTTEEIARQLGVTAQEVQDGRDAGRAYLVDSLD
AGRGGDHEGESSPQGRTPLTERLGYDDRELDLVDFRESVKPLMGTLSQREQLLLELRFWH
ALPQREIAARLGISQMHVSRLLSQTLAYLRERLEADEPTTNTGRTFTRGAAA
NT seq
1059 nt
NT seq
+upstream
nt +downstream
nt
atgcccgcgcactcccgctcggcgtcgaccgcaccgccgcgcgccgcgtcccgacaacgc
accgcgccagcaccagaccgcaccgccgagaagcaccgcaccgcaccccaccgagccccc
gccccctcggccgcacggccgggcacgggcggcaccgacaccgcacacccgctcccgccc
ggaatcgaggccgcgacccgctacacggcggacgaattgcgcggcatgggcaagtacgag
gcacgagcgctgagcgacacactgatccgccgcctgcgcaccctcgcccccgaagccgtc
gagtacggcgaactgcgcggcacgatcgtggagctgaacctcccgctcgtgcgctacgcg
gcccgcgagttcgggcaccggcgcgaggcgtacgaggacattctgcagaccgggatcgtc
ggcctcatcaaggccgtcgacgcgtacgacgtggaccgcggcgtcgaattcgccagtttc
gcgctgccgacgatctccggggagatcaagcggttcttccgtgacacctcgtggcccgtc
cacgtggcccgcggcctccaggaacgcttcctggcggtgacgcggacctcggaccggctc
gaacagaaactcggacgcgagccgacgaccgaggagatcgcgcggcaactgggcgtgacg
gcgcaggaagtccaggacggccgcgacgccggacgcgcgtacctcgtcgactcgctcgac
gccgggcgcggcggcgaccacgagggcgagagcagcccgcagggccgcaccccgctcacc
gagcgcctcggctacgacgaccgcgaactggacctcgtcgatttccgggagtccgtgaaa
ccgctgatgggcacgctgtcgcaacgcgagcaactccttctggaactgcgcttctggcac
gcgttgccgcagcgggagatcgccgcacggctcggcatctcgcagatgcacgtctcgcgc
ctgctctcgcagacgctcgcgtacctgcgcgaacgcctggaagccgacgaaccgaccacg
aacaccggccgcaccttcacgcgaggagccgcggcatga
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