Yinghuangia sp. ASG 101: LO772_08745
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Entry
LO772_08745 CDS
T07749
Name
(GenBank) RNA polymerase sigma factor SigF
KO
K03090
RNA polymerase sigma-B factor
Organism
yia
Yinghuangia sp. ASG 101
Brite
KEGG Orthology (KO) [BR:
yia00001
]
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03021 Transcription machinery [BR:
yia03021
]
LO772_08745
Transcription machinery [BR:
yia03021
]
Prokaryotic type
Bacterial type
RNA polymerase
Sigma factors
LO772_08745
BRITE hierarchy
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Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
Sigma70_r4
Sigma70_r2
Sigma70_r3
Sigma70_r4_2
HTH_24
HTH_Crp_2
NirdL-like_HTH
HTH_3
MarR_2
HTH_23
HTH_31
MarR
DUF7343
HNH_repeat
Motif
Other DBs
NCBI-ProteinID:
UGQ13667
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All DBs
Position
complement(2126264..2127343)
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AA seq
359 aa
AA seq
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MAVRLDEYDAAVTRGARSPRPATEPASVPPADPFADDLPGLAADLPGDGDTDTDTETDTE
TGDRAATAGDRPSDASDDTPDGDPAPATIDIDELLAYPQLLQHLPTPLAREAGDGLLARL
AGLEPGTSEHSYVRGLLVELNLPMVRHAAGRYRRRGEPVEDIVQVGTIGLIKAIDRYEAD
RGSSFMAYAMPTIIGEIKRFFRDTSWSVRVPRRLRELRTELLRATDELTATLGRTPTPRE
LAERIGITEEEVVEGLDACTVYTATSLDETAYGDADGQETVGDRLGAEDHELDLVEYREA
LRPLLAELPGRERAILVMRFYGNLTQAQIGERVGISQMHVSRLLARTLASLRERLMVPS
NT seq
1080 nt
NT seq
+upstream
nt +downstream
nt
atggctgtgcgcctcgacgagtacgatgccgccgtcacccggggcgcccgctctcccagg
ccggcgaccgagcccgcgagcgtaccgcccgccgatcccttcgccgacgatctgcccggc
ctcgcggccgacctccccggcgacggcgacaccgacaccgacaccgagaccgacaccgag
accggcgaccgcgccgccaccgccggcgaccgcccgtccgacgcctccgacgacaccccc
gacggcgacccggccccggcgacgatcgacatcgacgaactcctcgcctacccgcagctg
ctccagcacctccccacccccctcgcccgcgaggccggcgacggcctgctggcccgcctc
gccggtctcgaaccgggcacgtccgaacacagttacgtgcgcggcctgctggtcgagctg
aacctcccgatggtgcgccacgcggccggccgctaccggcgccgcggcgaacccgtcgag
gacatcgtccaggtcggcaccatcggcctcatcaaggcgatcgaccggtacgaggccgac
cgcggcagcagcttcatggcgtacgcgatgccgacgatcatcggtgagatcaaacgtttc
ttccgcgacacctcctggtcggtgcgggtcccccgccgcctccgcgaactgcgcaccgaa
ctgctccgcgccaccgacgagttgaccgccaccctgggccgcaccccgaccccgcgcgaa
ctcgccgagcggatcgggatcaccgaggaggaggtcgtcgaagggctcgacgcgtgcacc
gtctacaccgcgacctcgctcgacgagaccgcgtacggcgacgccgacgggcaggagacc
gtcggcgaccgcctcggcgccgaggaccacgaactcgacctggtcgaataccgcgaggcg
ctgcgccccctgctcgccgaactcccgggccgggaacgcgcgatcctcgtcatgcgcttc
tacggcaacctcacccaggcccagatcggcgagcgcgtcggcatcagccagatgcacgtc
tcgcgcttgctcgcccgcacgctggcgtcgctccgcgagcggctcatggtgcccagctga
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