Yinghuangia sp. ASG 101: LO772_11295
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Entry
LO772_11295 CDS
T07749
Symbol
ffh
Name
(GenBank) signal recognition particle protein
KO
K03106
signal recognition particle subunit SRP54 [EC:
3.6.5.4
]
Organism
yia
Yinghuangia sp. ASG 101
Pathway
yia02024
Quorum sensing
yia03060
Protein export
yia03070
Bacterial secretion system
Brite
KEGG Orthology (KO) [BR:
yia00001
]
09120 Genetic Information Processing
09123 Folding, sorting and degradation
03060 Protein export
LO772_11295 (ffh)
09130 Environmental Information Processing
09131 Membrane transport
03070 Bacterial secretion system
LO772_11295 (ffh)
09140 Cellular Processes
09145 Cellular community - prokaryotes
02024 Quorum sensing
LO772_11295 (ffh)
09180 Brite Hierarchies
09183 Protein families: signaling and cellular processes
02044 Secretion system [BR:
yia02044
]
LO772_11295 (ffh)
Enzymes [BR:
yia01000
]
3. Hydrolases
3.6 Acting on acid anhydrides
3.6.5 Acting on GTP to facilitate cellular and subcellular movement
3.6.5.4 signal-recognition-particle GTPase
LO772_11295 (ffh)
Secretion system [BR:
yia02044
]
Sec (secretion) system
Prokaryotic Sec-SRP core components
LO772_11295 (ffh)
Eukaryotic Sec-SRP protein
LO772_11295 (ffh)
BRITE hierarchy
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
SRP54
SRP_SPB
SRP54_N
AAA_22
CbiA
cobW
Zeta_toxin
AAA_24
ArsA_ATPase
APS_kinase
MMR_HSR1
AAA_18
nSTAND3
TsaE
NPHP3_N
AAA_33
AAA_16
6PF2K
Thymidylate_kin
ATP_bind_1
BET
Motif
Other DBs
NCBI-ProteinID:
UGQ14123
LinkDB
All DBs
Position
complement(2727521..2729065)
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AA seq
514 aa
AA seq
DB search
MFDTLSDRLAATFKNLRGKGRLSEADIDATAREIRVALLEADVALPVVREFVAHVKERAR
GAEVSQALNPAQQIVKIVNEELIRVLGGETRRLRFAKTGPTVIMLAGLQGAGKTTLAGKL
GKWLKTQKHSPLLVACDLQRPNAVNQLSVVAERAGVAVYAPEPGNGIGDPVKVARDSIEF
ATTKQYDVVVVDTAGRLGIDAELMRQAADIRDAVKPDEILFVVDAMIGQDAVTTAQAFLD
GVGFDGVVLSKLDGDARGGAALSVAQVTGRQIMFASNGEKLDDFDAFHPDRMASRILGMG
DMLSLIEMAEQKYDAEIALKAAEKIQKGGKDFTLEDFLQQMEQVKKMGSISKLLGMLPGM
GQMKEQIDSIDDRDLDRVAAIIKSMTPGERDDPKIINGSRRARIAKGSGCTVTEVNNLIE
RFFEARKMMTSMARGGGIPGMPGMGGGGGSRKKGKAPKQAKGKRQSGNPMKRKQDELAAA
QRREERAAQAFQLPGDDSDPSKFELPKGFEDYLK
NT seq
1545 nt
NT seq
+upstream
nt +downstream
nt
gtgttcgacactctttccgaccgcctcgcagcgaccttcaagaacctccggggcaaaggt
cgtctctccgaggcggacatcgacgccaccgcgcgcgagatcagggtcgccctgctcgaa
gcggacgtcgcgctgcccgtggtccgcgagttcgtggcgcacgtcaaggagcgcgcccgc
ggcgccgaggtgtcgcaggcgctcaaccccgcgcagcagatcgtcaagatcgtcaacgag
gagctgatccgcgtcctcggcggcgagacgcggcgcctgcggttcgccaagaccggcccg
accgtgatcatgctcgcgggcctccagggcgcgggcaagaccaccctcgcgggcaagctc
ggcaagtggctcaagacccagaagcactcgccgctgctcgtcgcgtgcgacctccagcgc
cccaacgcggtcaaccagctcagcgtggtcgccgagcgcgccggcgtcgcggtctacgcg
cccgagccgggcaacggcatcggcgacccggtcaaggtcgcccgcgactcgatcgagttc
gccacgaccaagcagtacgacgtggtcgtcgtcgacaccgccggccgcctcggcatcgac
gccgagctgatgcgacaggctgccgacatccgcgacgcggtcaagcccgacgagatcctt
ttcgtcgtcgacgccatgatcggccaggacgcggtcaccaccgcgcaggccttcctcgac
ggcgtcggcttcgacggcgtcgtcctgtcgaagctggacggcgacgcgcgcggtggtgcc
gcgctgtccgtcgcgcaggtcaccggccgccagatcatgttcgcgtcgaacggcgagaag
ctcgacgacttcgacgcgttccaccccgaccggatggcttcccgcatcctcggcatgggc
gacatgctcagcctgatcgagatggcggagcagaagtacgacgccgagatcgccctcaag
gccgccgagaagatccaaaagggcggcaaggacttcactctggaggacttcctccagcag
atggagcaggtcaagaagatggggtcgatctccaagctgctcggcatgctgcccggcatg
gggcagatgaaggagcagatcgacagcatcgacgaccgcgacctcgaccgggtcgcggcc
atcatcaagtcgatgaccccgggcgagcgcgacgacccgaagatcatcaacggctcgcgg
cgcgcccgtatcgccaagggctccggctgcaccgtcaccgaggtcaacaacctcatcgaa
cgcttcttcgaggcgcgcaagatgatgacgtccatggcccgcggcggcggcatcccgggc
atgcccgggatgggcggcggcggtggctcgcgcaagaagggcaaggcgcccaagcaggcc
aagggcaagcgccagtcgggcaacccgatgaagcgcaagcaggacgagctggccgcggcc
cagcggcgcgaggagcgggccgcgcaggcgttccagctgccgggcgacgacagcgacccg
tcgaagttcgaactgcccaaggggttcgaggactacctcaagtag
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