Yinghuangia sp. ASG 101: LO772_11355
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Entry
LO772_11355 CDS
T07749
Symbol
mutM
Name
(GenBank) bifunctional DNA-formamidopyrimidine glycosylase/DNA-(apurinic or apyrimidinic site) lyase
KO
K10563
formamidopyrimidine-DNA glycosylase [EC:
3.2.2.23
4.2.99.18
]
Organism
yia
Yinghuangia sp. ASG 101
Pathway
yia03410
Base excision repair
Brite
KEGG Orthology (KO) [BR:
yia00001
]
09120 Genetic Information Processing
09124 Replication and repair
03410 Base excision repair
LO772_11355 (mutM)
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03400 DNA repair and recombination proteins [BR:
yia03400
]
LO772_11355 (mutM)
Enzymes [BR:
yia01000
]
3. Hydrolases
3.2 Glycosylases
3.2.2 Hydrolysing N-glycosyl compounds
3.2.2.23 DNA-formamidopyrimidine glycosylase
LO772_11355 (mutM)
4. Lyases
4.2 Carbon-oxygen lyases
4.2.99 Other carbon-oxygen lyases
4.2.99.18 DNA-(apurinic or apyrimidinic site) lyase
LO772_11355 (mutM)
DNA repair and recombination proteins [BR:
yia03400
]
Prokaryotic type
SSBR (single strand breaks repair)
BER (base exicision repair)
DNA glycosylases
LO772_11355 (mutM)
BRITE hierarchy
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
Fapy_DNA_glyco
H2TH
zf-FPG_IleRS
NFACT_N
Zn_ribbon_6
Motif
Other DBs
NCBI-ProteinID:
UGQ14135
LinkDB
All DBs
Position
complement(2746823..2747725)
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AA seq
300 aa
AA seq
DB search
MPELPEVEVVRRGLERWVVGRTIASVGVTHPRAVRRHAAGPDDFAAVLSGARIEAARRRG
KYLWLPLTAPGAAAPDDALLAHLGMSGQLLVKKPDAPRAKHLHVRFTFTDGGDELWFVDQ
RTFGGVSVEHGGAVLPPSIAHIARDVLDPLFDGKAFHAALRRRDSELKRALLDQSLVSGI
GNIYADEALWRARLHGARSTATMTRPQTARLLDAVREVMTDALAAGGTSFDSLYVNVNGS
SGYFARSLNAYGREGDPCDRCATPIRRITFMNRSSYFCTKCQPIPRPRSTTRRESPTTTP
NT seq
903 nt
NT seq
+upstream
nt +downstream
nt
gtgccggagctgcccgaggtcgaggtcgtgcggcgcggactggagcgctgggtggtgggc
cggaccatcgcgtcggtgggcgtcacccacccgcgcgcggtacgccgccacgcggccggg
ccggacgacttcgcggccgtcctgtccggcgcccggatcgaggccgcgcgccgccggggc
aaatacctgtggctgccgttgaccgcgcccggcgccgccgcgcccgatgacgcgctgctc
gcccacctgggaatgagcggccaactcctcgtcaaaaagcccgacgcgccgcgcgcgaaa
cacctccacgtgcggttcacgttcaccgacggcggcgacgagctgtggttcgtcgaccag
cgcacgttcggcggcgtctcggtcgagcacggaggggcggtgctgccgccgtcgatcgcg
cacatcgcgcgggacgtcctcgatcccctgttcgacggcaaggccttccacgccgcgctc
cggcgccgcgactccgagctgaagcgcgcgctgctggaccagtccctggtgagcggtatc
ggcaacatctacgccgacgaggccctgtggcgcgcccgcctgcacggcgcccgctcgacc
gccacgatgaccaggccgcagaccgcccgcctgctcgacgcggtacgcgaggtcatgacc
gacgccctggccgccggcggcacgtcgttcgacagcctgtacgtcaacgtcaacggcagc
agcggctacttcgcacgctccctgaacgcgtacggccgcgagggcgacccctgcgaccgc
tgcgcgacccccatacgccgcatcaccttcatgaaccgcagcagctacttctgcacgaag
tgccagccgattccccgtccccgctccacaacccgccgggaatccccgaccaccaccccc
tga
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