Yinghuangia sp. ASG 101: LO772_13750
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Entry
LO772_13750 CDS
T07749
Symbol
pcrA
Name
(GenBank) DNA helicase PcrA
KO
K03657
ATP-dependent DNA helicase UvrD/PcrA [EC:
5.6.2.4
]
Organism
yia
Yinghuangia sp. ASG 101
Pathway
yia03420
Nucleotide excision repair
yia03430
Mismatch repair
Brite
KEGG Orthology (KO) [BR:
yia00001
]
09120 Genetic Information Processing
09124 Replication and repair
03420 Nucleotide excision repair
LO772_13750 (pcrA)
03430 Mismatch repair
LO772_13750 (pcrA)
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03400 DNA repair and recombination proteins [BR:
yia03400
]
LO772_13750 (pcrA)
Enzymes [BR:
yia01000
]
5. Isomerases
5.6 Isomerases altering macromolecular conformation
5.6.2 Enzymes altering nucleic acid conformation
5.6.2.4 DNA 3'-5' helicase
LO772_13750 (pcrA)
DNA repair and recombination proteins [BR:
yia03400
]
Prokaryotic type
SSBR (single strand breaks repair)
NER (nucleotide excision repair)
GGR (global genome repair) factors
LO772_13750 (pcrA)
MMR (mismatch excision repair)
Other MMR factors
LO772_13750 (pcrA)
SSDB
Ortholog
Paralog
GFIT
Motif
Pfam:
UvrD-helicase
UvrD_C
AAA_19
PcrA_UvrD_tudor
UvrD_C_2
AAA_30
AAA_11
DEAD
ResIII
Motif
Other DBs
NCBI-ProteinID:
UGQ14551
LinkDB
All DBs
Position
complement(3295173..3297662)
Genome browser
AA seq
829 aa
AA seq
DB search
MSKLFDDLPLPGFDADVPADVPVPAEPEPDDAPPPPEYDPAPDDLFAGDYAPPPEPYEAY
YRNGAAKPAVDPARLLDGMNPQQRAAVVHEGSPLLIVAGAGSGKTRVLTHRIAYLLGARG
VHPGQILAITFTNKAAGEMKERVEALVGPRAKAMWVSTFHSSCVRILRQQYKKLGLSSSF
SIYDAADSQRLMAMVCRDLDLDAKQFPPRKFNAQVSNLKNELVDPETYAAGAQNDAERKL
AEAYTLYQARLRQANALDFDDLIMTTVNLLQAFPDVAEHYRRRFRHVLVDEYQDTNHAQY
VLVRELVGGAVGQEPKRTVDGDLVNPAAEGLAHVPPAELCVVGDADQSIYAFRGATIRNI
LDFESDYPAATTILLEQNYRSTQTILAAANAVIERNSNRRAKNLWTDSGQGTAIIGNTAD
DEHAEAQFVADEIDRLTDAGTITPSQVAVFYRTNAQSRVFEEVFIRVGLPYKVVGGVRFY
ERKEVRDALAYLRLLANPDDVVSLRRILNVPKRGIGDRAEACVEVLAARDRIPFAEALRR
AHEAPGMATRSAKAVAGFVTLVDQLRGVVEGGAGPATVLEAVLEQTGYLAELQASNDPQD
ETRIENLQELAAVALEFEQAQPEGTLADFLEQVALVADSDQIPDAESGGVVTLMTLHTAK
GLEFPVVFLTGLEDGVFPHMRALGDTKELEEERRLAYVGITRARERLYVTLSRVRSAWGA
PAYNPPSRFLQELPEKLVEWRGKAPSEGQALSAAKSVRSAPVGRLGGPSRIVDREVVALK
PGDRVTHDKFGLGTVVATQGEGDKTQATIDFGASGTKQLLLRYAPVEKL
NT seq
2490 nt
NT seq
+upstream
nt +downstream
nt
atgagcaaactcttcgacgacctgccgctgcccgggttcgacgccgacgtcccggccgac
gtcccggtgcccgccgaaccggagccggacgacgccccgccgccgcccgaatacgacccg
gcccccgacgacctgttcgccggcgactacgccccgcccccggagccgtacgaggcctac
taccgcaacggcgcggccaagcccgccgtcgatcccgcgcgcctgctcgacggcatgaac
ccgcagcagcgcgccgccgtcgtccacgaaggctcgccgctgctcatcgtggcgggcgcg
ggctccggcaagacgcgcgtgctcacccaccgcatcgcgtacctgctgggcgcgcgcggc
gtccaccccggccagatcctcgcgatcaccttcaccaacaaggccgccggggagatgaag
gagcgcgtcgaggccctggtcggcccgcgcgcgaaggccatgtgggtctcgacgttccac
tcgtcgtgcgtgcgcatcctgcgccagcagtacaagaagctcgggctcagctcgtccttc
tccatctacgacgccgccgactcgcagcgcctgatggcgatggtctgccgcgacctggac
ctggacgccaagcagttcccgccgcgcaagttcaacgcccaggtgtccaacctcaagaac
gaactggtcgaccccgagacgtacgcggccggcgcgcagaacgacgccgagcgcaagctc
gccgaggcgtacaccctctaccaggcccggctgcgccaggccaacgcgctggacttcgac
gacctgatcatgaccacggtcaacctcctccaggcgttccccgacgtcgccgagcactac
cggcgccgcttccggcacgtgctcgtcgacgagtaccaggacaccaaccacgcgcaatac
gtgctggtccgcgagctggtgggcggggccgtcgggcaggagcccaagcgcaccgtcgac
ggcgacctggtcaacccggcggccgaaggcctcgcgcacgtcccgcccgccgaactgtgc
gtggtgggcgacgccgaccagtcgatctacgccttccggggcgcgacgatccgcaacatc
ctcgacttcgagagcgactacccggccgcgacgacgatcctgctggagcagaactaccgc
tcgacgcagacgatcctcgccgccgccaacgcggtcatcgaacgcaacagcaaccgccgc
gcgaagaacctgtggacggactccggccagggcaccgcgatcatcggcaacaccgccgac
gacgagcacgccgaggcgcagttcgtcgcggacgagatcgaccggctcaccgacgccggc
acgatcaccccgagccaggtcgcggtgttctaccgcaccaacgcgcaatcccgcgtgttc
gaggaggtgttcatccgggtcggcctgccgtacaaggtcgtcggcggggtgcgcttctac
gagcgcaaggaggtccgcgacgcgctcgcgtacctgcggctgctcgccaacccggacgac
gtcgtgtcgctgcgccgaatcctgaacgtgcccaagcgcggcatcggggaccgcgccgag
gcgtgcgtggaggtgctggcggcgcgcgaccggatcccgttcgcggaggcgctgcggcgc
gcgcacgaggcaccgggcatggcgacgcggtcggcgaaggcggtcgccggtttcgtgacg
ctcgtcgaccagctgcgcggggtcgtcgagggcggcgcggggcccgcgacggtcctcgaa
gcggtcctcgaacagaccggctacctcgccgagttgcaggcctcgaacgacccgcaggac
gagacgcggatcgagaaccttcaggaactcgccgcggtggccctggagttcgagcaggcc
cagcccgaggggacgctcgccgacttcctggagcaggtggcgctggtcgccgactccgac
cagatccccgacgccgagagcggcggcgtggtcacgctgatgacgttgcacaccgcgaag
ggcctggagttcccggtggtgttcctcaccggtctggaggacggcgtgttcccgcacatg
cgggcgctcggcgacacgaaggagctggaggaggagcggcggctcgcgtacgtcggcatc
acgcgggcccgcgagcggctgtacgtgacgctgtcgcgcgtccgcagcgcgtggggcgcc
cccgcgtacaacccgccgtcgcggttcctccaggagctgcccgagaagctggtcgagtgg
cgcggcaaggccccgtcggagggccaggcgctgtcggccgccaagtcggtgcgttcggcg
cccgtcgggcgtctcggcggcccgagccgcatcgtcgaccgcgaggtcgtcgcgctcaag
ccgggcgaccgggtcacgcacgacaagttcggcctcggcacggtcgtggcgacgcagggc
gagggcgacaagacccaggcgacgatcgacttcggggcgtcggggaccaagcagctgctg
ctgcggtacgcgccggtggagaagctgtag
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