Yinghuangia sp. ASG 101: LO772_13875
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Entry
LO772_13875 CDS
T07749
Symbol
groL
Name
(GenBank) chaperonin GroEL
KO
K04077
chaperonin GroEL [EC:
5.6.1.7
]
Organism
yia
Yinghuangia sp. ASG 101
Pathway
yia03018
RNA degradation
Brite
KEGG Orthology (KO) [BR:
yia00001
]
09120 Genetic Information Processing
09123 Folding, sorting and degradation
03018 RNA degradation
LO772_13875 (groL)
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03019 Messenger RNA biogenesis [BR:
yia03019
]
LO772_13875 (groL)
03110 Chaperones and folding catalysts [BR:
yia03110
]
LO772_13875 (groL)
03029 Mitochondrial biogenesis [BR:
yia03029
]
LO772_13875 (groL)
09183 Protein families: signaling and cellular processes
04147 Exosome [BR:
yia04147
]
LO772_13875 (groL)
Enzymes [BR:
yia01000
]
5. Isomerases
5.6 Isomerases altering macromolecular conformation
5.6.1 Enzymes altering polypeptide conformation or assembly
5.6.1.7 chaperonin ATPase
LO772_13875 (groL)
Messenger RNA biogenesis [BR:
yia03019
]
Prokaryotic type
Bacterial mRNA degradation factors
Other RNA degradation factors
Chaperones
LO772_13875 (groL)
Chaperones and folding catalysts [BR:
yia03110
]
Heat shock proteins
HSP60 / Chaperonin
LO772_13875 (groL)
Mitochondrial biogenesis [BR:
yia03029
]
Mitochondrial protein import machinery
Matrix
Other matrix factors
LO772_13875 (groL)
Exosome [BR:
yia04147
]
Exosomal proteins
Exosomal proteins of haemopoietic cells (B-cell, T-cell, DC-cell, reticulocyte, and mast cell)
LO772_13875 (groL)
Exosomal proteins of other body fluids (saliva and urine)
LO772_13875 (groL)
Exosomal proteins of breast cancer cells
LO772_13875 (groL)
Exosomal proteins of colorectal cancer cells
LO772_13875 (groL)
Exosomal proteins of bladder cancer cells
LO772_13875 (groL)
BRITE hierarchy
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
Cpn60_TCP1
Motif
Other DBs
NCBI-ProteinID:
UGQ14572
LinkDB
All DBs
Position
complement(3331997..3333628)
Genome browser
AA seq
543 aa
AA seq
DB search
MAKILQFDEHARRSLERGVNALADAVKVTIGPKGRNVVIDKKFGAPTITNDGVTIAREVE
LDDPYENLGAQLAKEVATKTNDIAGDGTTTATVLAQALVREGLRNVAAGAAPMDLKKGID
AAVKAVSDELLGTARAIDGKDDIANVAALSAQDRQIGELIAEAMDKVGKDGVITVEESNT
MGLELEFTEGLQFDKGYLSPYMVTDQERMEAVLDDPYILINQGKISAIAELLPILEKVIQ
NGGNKPLLIVAEDIEGEALSTLVVNKIRGTFNAVAVKAPGFGDRRKAMLEDMAILTGGQV
IAPEVGLKLDQVGLEVLGTARRVTITKDATTVVDGAGAADQIADRVRQIKAEIENTDSDW
DREKLQERLAKLAGGVCVIRVGAATEVELKEKKHRLEDAVSATRAAIEEGIVAGGGAALV
HASAVLADNLGHTGDVATGVSVVRRAAVEPLRWIAENAGLEGYVIVNKVQELKVGHGYNA
ASGEYGDLLKAGVIDPVKVTRSALENAASIASLLLTTESLVVEKPAEPEPAAHGHSHGHG
HAH
NT seq
1632 nt
NT seq
+upstream
nt +downstream
nt
atggccaagattctgcagttcgacgagcatgcccgccgttcgctggagcgcggcgtcaac
gcgctcgcggacgcggtcaaggtgaccatcggccccaagggccgcaacgtcgtcatcgac
aagaagttcggtgcgccgaccatcacgaacgacggcgtgacgatcgcccgtgaggtcgag
ctggacgacccgtacgaaaacctcggcgcgcaactcgcgaaggaggtggcgaccaagacc
aacgacatcgcgggcgacggcaccaccaccgcgacggtgctcgcgcaggcgctggtccgc
gagggcctgcgcaacgtcgccgccggtgcggcgccgatggacctgaagaagggcatcgac
gcggcggtcaaggccgtctcggacgagctgctcggcaccgcgcgcgcgatcgacggcaag
gacgatatcgccaacgtcgccgcgctgtccgcgcaggaccgccagatcggcgagctgatc
gccgaggcgatggacaaggtcggcaaggacggcgtcatcaccgtcgaagagtcgaacacc
atgggcctggagctggagttcaccgagggcctgcagttcgacaagggctacctgtcgccg
tacatggtcaccgaccaggagcgcatggaagcggtcctggacgacccgtacatcctgatc
aaccagggcaagatctcggcgatcgccgagctgctgccgatcctggagaaggtcatccag
aacggcggcaacaagccgctgctgatcgtcgccgaggacatcgagggcgaggcgctgtcc
accctcgtcgtcaacaagatccgcggcacgttcaacgcggtcgcggtcaaggcccccggc
ttcggcgaccgccgcaaggcgatgctggaggacatggccatcctgaccggcggccaggtc
atcgcccccgaggtcggcctgaagctggaccaggtcgggctcgaggtcctcggcaccgcg
cgccgcgtcacgatcaccaaggacgccaccacggtcgtcgacggcgcgggcgccgccgac
cagatcgcggaccgcgtccggcagatcaaggccgagatcgagaacaccgactccgactgg
gaccgcgagaagctccaggagcgcctcgcgaagctggccggcggtgtgtgcgtgatccgc
gtgggtgcggccaccgaggtcgagctcaaggagaagaagcaccgcctggaggacgcggtc
tccgcgacccgcgcggccatcgaggagggcatcgtcgcgggaggcggcgccgcgctcgtg
cacgcgtccgcggtgctcgcggacaacctcggccacaccggcgacgtcgcgaccggggtg
tcggtcgtgcgccgcgcggccgtcgaaccgctgcgctggatcgcggagaacgccggcctc
gagggctacgtcatcgtgaacaaggtgcaggagctgaaggtcggccacggctacaacgcg
gcctccggcgagtacggcgacctgctcaaggccggcgtcatcgacccggtcaaggtcacg
cgctccgctctggagaacgcggcgtccatcgcgtcgctgctgctgaccaccgagtcgctg
gtcgtcgagaagccggccgagccggagccggcggcgcacggccacagccacggccacggg
cacgcccactga
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