KEGG   Yinghuangia sp. ASG 101: LO772_16230
Entry
LO772_16230       CDS       T07749                                 
Name
(GenBank) CRISPR-associated endonuclease Cas3''
  KO
K07012  CRISPR-associated endonuclease/helicase Cas3 [EC:3.1.-.- 5.6.2.4]
Organism
yia  Yinghuangia sp. ASG 101
Brite
KEGG Orthology (KO) [BR:yia00001]
 09180 Brite Hierarchies
  09183 Protein families: signaling and cellular processes
   02048 Prokaryotic defense system [BR:yia02048]
    LO772_16230
Enzymes [BR:yia01000]
 5. Isomerases
  5.6  Isomerases altering macromolecular conformation
   5.6.2  Enzymes altering nucleic acid conformation
    5.6.2.4  DNA 3'-5' helicase
     LO772_16230
Prokaryotic defense system [BR:yia02048]
 CRISPR-Cas system
  Type I CRISPR-Cas system
   Type I signiture cas proteins
    LO772_16230
SSDB
Motif
Pfam: Cas3-like_C_2 DEAD Cas3_HD Helicase_C ResIII HD PhoH
Other DBs
NCBI-ProteinID: UGQ14975
LinkDB
Position
complement(3817329..3819578)
AA seq 749 aa
MHLWAHSPNHLGVRHALADHLYGSAELAGEFASGFDAESAARYLTLVHDVGKAGCAWQAG
LARVGTGGGRVGGDHKLAGTWLASRHLPKTFSRIVLGHHGGLGSKTNVEEALGEASRTLQ
TLQEAVDRAAVLVPEILPPSKPTVPAWLTELPRTEQGIALDLLIRMLFSCLVDADFLDTQ
AHFAASPARVGHPLEVSELLARFEEGRKQLLAERSPSAVDGLRQEVYEQALAAAAGPPGV
YRLQVPTGGGKTLAAGAFGLHHAVMHGLRRVVVAVPFISITEQNAAIYRRLLERDGDAVP
ALLEHHSAVDLDKDSGESNAPVSWSKLAAENWDSPFVVTTMVRLFESLFSHKPSAMRRLH
RLAGSVVVLDEVQALPDRLLVPILSGLRGLCDHFGMTVLLASATQPEFVVVSSFAGMRQQ
PVVADPVPLYDALRRVRYEWRLDPRPSLEEIGREAAGLDQVLVVVNTTKDCAAVHRAMER
GRSADAGPVFHLSTRMAPEHRRRTLIEIRELLADGEAVAVVATPLVEAGVDLDFPVVFRA
LAPAESLQQAAGRCNREGNLVEPGLVVVFHPADGGEPKSESWSQALKATQEKFGLHPLAD
PDDLAAMEAYYQLRLNRQGDESLGAGIEKLRGELDFPEVAKQFRMIDDEATSPVVVLYSG
ADDEAERERELDAIREAVADLRSPYPSGPDVLRGLQPYIASLPRGTAWDVRAKGLASPVI
GDLLLWEGDYHPQRGIDIENPENVESYSL
NT seq 2250 nt   +upstreamnt  +downstreamnt
atgcatttatgggcgcacagccctaaccatctcggggttcgtcacgcgcttgccgatcac
ttgtacggatcggctgagttggcgggggagttcgcaagcggtttcgatgccgagtccgcg
gcccggtatctgacgctggtccacgatgtcgggaaggccggctgtgcctggcaagccggg
ctcgcgcgcgtcggtacgggcggaggccgcgtgggcggcgatcacaaactcgccggtact
tggctggcgtctcggcatcttcccaagacgttctcccggattgtgctgggtcaccatggc
ggtctcggtagcaagaccaatgtggaggaggctctcggcgaggcctcccgcacgctccag
acgttgcaggaggccgtcgaccgcgccgcagtgttggtgccggagatcctcccgccctcg
aagccgacggttccggcctggttgacggaacttccccgaaccgaacagggcatcgccctc
gatctgctgatccggatgctgttcagttgcctcgtcgatgcggatttcctggacacacag
gcgcatttcgccgcctcgccagcccgcgtcggtcacccgctcgaagtgtcagagctgttg
gcgcggttcgaggaggggcgcaagcagcttctggccgagcggtcgccctcggcggtggat
gggctgcggcaggaggtgtacgagcaggctctcgccgctgcggccgggccacccggtgtg
taccggttgcaggtgccgaccggcggcggcaagacgctggccgcaggggctttcgggctc
caccacgccgtcatgcacgggctgcgtcgggtcgtcgtggcggtgccgttcatctcaatc
accgagcaaaacgccgcgatctaccgacggttgcttgagcgcgatggagatgcggttccg
gcgttgttggagcaccacagtgccgtggacctcgacaaggacagcggcgagtccaatgcc
ccggtctcatggtcgaaactcgccgcggagaactgggactccccgttcgtggtgaccacg
atggtccgcttgttcgagtcgctgttctcccacaagccgtcggcgatgcggcggttgcac
cgtctggccggttcggtcgtcgtgctggacgaggtgcaggcgctgccggaccggctgttg
gtgccgatcctgtcgggactgcgggggctctgcgaccacttcgggatgacggtgttgctg
gcgtcggcgacgcagccggagttcgtggtcgtgtcgtcgttcgccgggatgcggcagcag
ccggtggtggccgatccagtcccgctgtatgacgcgctgcgccgggttcggtacgagtgg
cgtctggatcctcggccgagcctggaggagatcgggcgggaggccgcaggtctcgaccag
gtgctggtcgtcgtcaacacgacgaaggactgcgccgccgttcaccgggcaatggagcgt
gggcgatcggcagatgccggcccggtgttccacttgtcgacgcggatggctcccgagcac
cgccgtcggaccctgatcgaaatccgcgagctgctggctgacggcgaggccgtggcggtc
gtcgcgactcccttggtcgaggcgggtgtcgatctcgatttcccggtggtcttccgggcg
ttggcgcccgccgagtcgcttcagcaggccgctggccggtgcaaccgcgaggggaacctg
gtggagcccggccttgtggtggttttccaccccgcagacggcggcgagcccaagtcggaa
tcgtggtctcaggccctgaaagcgacccaagagaagttcggtctgcacccgctggcggac
ccggacgacctcgcggccatggaggcctattaccagctgcggctgaaccggcaaggcgac
gagagcctcggcgccgggatcgagaagctgcgcggcgaactggatttcccggaggtggcc
aagcagttccgcatgatcgacgacgaggccaccagcccggtggtggtgctgtacagcggc
gcggacgacgaggcggaacgcgagcgtgagctcgacgcgatccgcgaggcggtcgccgac
ttgcggtcgccgtacccgtctggtcccgacgtgctgcgcgggcttcagccgtacatcgcc
tccctcccgcgtggcaccgcatgggacgtgagggcgaagggcttggcgtccccggtcatc
ggtgaccttctgctgtgggagggcgattaccacccccagcgcgggatcgacatcgagaac
cccgagaacgtggagagttacagcttatga

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