Yinghuangia sp. ASG 101: LO772_17435
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Entry
LO772_17435 CDS
T07749
Name
(GenBank) Ku protein
KO
K10979
DNA end-binding protein Ku
Organism
yia
Yinghuangia sp. ASG 101
Brite
KEGG Orthology (KO) [BR:
yia00001
]
09120 Genetic Information Processing
09124 Replication and repair
03450 Non-homologous end-joining
LO772_17435
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03400 DNA repair and recombination proteins [BR:
yia03400
]
LO772_17435
DNA repair and recombination proteins [BR:
yia03400
]
Prokaryotic type
DSBR (double strand breaks repair)
NHEJ (non-homologous end-joining)
Two-component NHEJ DNA repair complex
LO772_17435
BRITE hierarchy
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Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
Ku
HC2
Motif
Other DBs
NCBI-ProteinID:
UGQ15191
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All DBs
Position
complement(4081093..4082136)
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AA seq
347 aa
AA seq
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MRAVWKGAISFGLVSIPVKVVSAIGGEHTVKFHQMHRKDQGRVRYRKVCELDGEELAPNE
IVRGYESSDGRVAVVTDDDLADLPLPTARTIEVHGFLAADDVDPLRLGKPYYLTPDTSGA
KPYVLMREALRRSDKAAVAKLAMRGHEILALVRVQEDVLVLHQLYWPDEINSTQGVAPTE
RVRVTDAELDMADTLIDALGTADLAEYHDEYQAAVEELVTAKLEGAAPVEAEAPAEEAGG
KVIDLMAALRQSVEEATGGRAAPEPKGADAKKTASKRAPAKKAAGRGAAGAKPAKGTGAA
KSAAGRSTARKTAGGKAANRSGTAKSGAQSGKSGTKTAAKRPARKTG
NT seq
1044 nt
NT seq
+upstream
nt +downstream
nt
gtgcgtgctgtctggaaaggggcgatcagcttcgggctggtgagcatccccgtcaaagtc
gtctcggccatcggcggcgagcacacggtgaagttccaccagatgcaccgcaaggaccag
ggccgggtccgctaccgcaaggtgtgcgagctggacggcgaggagctggcgccgaacgag
atcgtgcgtgggtacgagtcctccgacgggcgcgtcgcggtggtcaccgacgacgacctc
gcggacctgccgctgccgaccgcgcgcaccatcgaggtgcacggcttcctcgccgccgac
gacgtcgacccgctgcgcctgggcaagccctactacctcacgcccgacacctccggcgcc
aagccgtacgtgctgatgcgcgaggcgctgcgccgttcggacaaggccgcggtcgcgaag
ctggcgatgcgcgggcacgagatcctggccctggtgcgcgtacaagaggacgtgctggtg
ctgcaccagctctactggcccgacgagatcaactcgacgcagggcgtcgccccgaccgag
cgcgtgcgcgtcacggacgccgagctggacatggcggacacgctcatcgacgccctgggg
acggcggacctcgccgagtaccacgacgaataccaggcggcggtcgaggagttggtgacc
gcgaagctggagggtgccgcgccggtggaggccgaggcaccggccgaggaggccggcggc
aaggtgatcgacctgatggccgcgctgcggcagagcgtcgaggaggccacgggcggtcgc
gccgcgccggagccgaagggggcggacgcgaagaagacggcgtccaagcgggctccggcg
aagaaggccgcgggccggggggcggccggcgcgaagccggccaaggggacgggtgccgcg
aagtcggcggccgggcggtcgacggcgcggaagacggcgggcgggaaggcggcgaaccgc
tcgggcaccgcgaagtccggtgcgcagagcgggaagtccgggacgaagaccgcggccaag
cgccccgcacgcaagacgggctga
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