Yinghuangia sp. ASG 101: LO772_18610
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Entry
LO772_18610 CDS
T07749
Name
(GenBank) RNA polymerase sigma factor SigF
KO
K03090
RNA polymerase sigma-B factor
Organism
yia
Yinghuangia sp. ASG 101
Brite
KEGG Orthology (KO) [BR:
yia00001
]
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03021 Transcription machinery [BR:
yia03021
]
LO772_18610
Transcription machinery [BR:
yia03021
]
Prokaryotic type
Bacterial type
RNA polymerase
Sigma factors
LO772_18610
BRITE hierarchy
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Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
Sigma70_r2
Sigma70_r4
Sigma70_r3
Sigma70_r4_2
HTH_Crp_2
HTH_23
DUF7343
Sigma70_ECF
GerE
HTH_3
MarR_2
KORA
MarR
HTH_Tnp_4
Motif
Other DBs
NCBI-ProteinID:
UGQ08987
LinkDB
All DBs
Position
complement(4346330..4347229)
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AA seq
299 aa
AA seq
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MSALLDTKPGHDEPVPRPRPEVPHRRRPIADLDPFDVIGSDPAPHEPRDGADVRQISAAL
FTRLAALDPGTADHGDVRDQLIRQNLPLVRYAANRFRHRNEPHEDVVQVGTIGLIKAIDR
FDPDRGVQFPSYAMPTIIGEIKRYFRDSGWSLRVPRRVQELWLSLSEAIETLSQAHDRAP
TVAEIGAYLKVTPEEVVSCLEATNAYAPSSLDATDGTEERTLADRLGYQDQALEGVEYRE
ALRPLLSRLPDRERTILLMRFFHSMSQSQIATELGISQMHVSRLLSRTLTRLRAELGDC
NT seq
900 nt
NT seq
+upstream
nt +downstream
nt
atgtccgctctgctcgacaccaagcccggtcacgacgaaccagtgcctcgcccccgcccc
gaggtcccgcaccgtcggcgcccgatcgccgacctggaccccttcgatgtcatcgggagc
gatcccgctccccacgaaccacgcgacggcgccgacgtacgccagatctccgcggcgctg
ttcacccgcctcgccgcactcgaccccggcaccgccgaccacggcgacgtccgcgaccaa
ctcatccgccagaacctgccgctcgtgcgctacgccgcgaaccgtttccggcaccgcaac
gagccgcacgaagacgtcgtccaggtcggcaccatcggcctcatcaaggccatcgaccgc
ttcgaccccgaccgcggcgtgcagttcccctcgtacgcgatgccgaccatcatcggcgag
atcaagcgctacttccgcgacagcggctggtcgctgcgcgtcccccggcgcgtccaggag
ctgtggctctcgctgtcggaggccatcgaaaccctctcccaggcgcacgaccgcgccccg
accgtcgccgagatcggcgcgtacctcaaggtcacccccgaggaggtcgtctcctgcctg
gaggccacgaacgcctacgcgccctcgtccctggacgccaccgacggcaccgaggaacgc
accctcgccgaccgcctcggctaccaggaccaggccctcgaaggcgtcgagtaccgcgag
gccctgcgccccctgctgtcccgcctgcccgaccgcgagcgcaccatcctgctgatgcgg
ttcttccacagcatgtcgcagtcccaaatcgccacggaactgggcatctcgcagatgcac
gtctcgcgcctgctctcccgcacgttgacccgactgcgcgcggaactgggtgactgctga
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