Yinghuangia sp. ASG 101: LO772_23540
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Entry
LO772_23540 CDS
T07749
Symbol
recO
Name
(GenBank) DNA repair protein RecO
KO
K03584
DNA repair protein RecO (recombination protein O)
Organism
yia
Yinghuangia sp. ASG 101
Pathway
yia03440
Homologous recombination
Brite
KEGG Orthology (KO) [BR:
yia00001
]
09120 Genetic Information Processing
09124 Replication and repair
03440 Homologous recombination
LO772_23540 (recO)
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03400 DNA repair and recombination proteins [BR:
yia03400
]
LO772_23540 (recO)
DNA repair and recombination proteins [BR:
yia03400
]
Prokaryotic type
DSBR (double strand breaks repair)
HR (homologous recombination)
RecFOR pathway proteins
LO772_23540 (recO)
NHEJ (non-homologous end-joining)
SHDIR (short-homology-dependent illegitimate recombination)
RecET pathway
LO772_23540 (recO)
BRITE hierarchy
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
RecO_C
RecO_N
DUF7573
Motif
Other DBs
NCBI-ProteinID:
UGQ09860
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Position
5479844..5480596
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AA seq
250 aa
AA seq
DB search
MSLYRDEGVVLRTQKLGEADRIITLLTRGHGRIRAVARGVRRTKSKFGARVEPFAHVDVQ
FFVKGSDFPGRGLPVITQAETLGAYGGSLVSDYPAYTAGTAILETAERLTDHEGEPALQQ
YLLLIGALRSLDARAHEAGLVLDAFLLRSLAVAGYAPSFGDCARCGLTGRHRFFSVAGGG
AVCGDCRPAGSVVPSPETLDLLGALLAGDWACADASEARHRREGSGLVAAYLQWHLERGI
RSLRLVERSS
NT seq
753 nt
NT seq
+upstream
nt +downstream
nt
atgagcctttaccgcgacgaaggcgtcgtgctgcgcacgcagaagctcggcgaggcggac
cgcatcatcacgcttctgacacgcggacacggacgcatacgggccgtcgcgcgcggcgtg
cggcggacgaagtcgaagttcggtgcgcgggtcgaacccttcgcccacgtcgacgtgcag
ttcttcgtcaagggcagcgacttccccgggcgcggcctgccggtgatcacccaggcggag
accctgggggcgtacggcggctcgctggtctcggactaccccgcctacaccgcgggcacc
gcgatcctggagaccgccgagaggctcaccgatcacgaaggcgaaccggcgctccagcag
tacctgctgctcatcggcgcgctgcgcagcctcgacgcgcgggcgcacgaagccgggctc
gtgctggacgccttcctgctgcggtcgctcgcggtcgcgggctacgcgccgagcttcggc
gactgcgcgcgctgcgggctcaccgggcggcaccggttcttctcggtggcgggaggcggc
gccgtatgcggggactgccgcccggccggatccgtcgtaccctctcccgagaccctcgat
ctgctcggcgcgctgctggccggagactgggcgtgtgccgacgcgagtgaggctcggcac
cggcgcgagggcagcggcctcgtggccgcgtatctgcaatggcacttggagcggggcatc
cgctcgctgagactggtggagcgatcatcgtga
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