Yinghuangia sp. ASG 101: LO772_23790
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Entry
LO772_23790 CDS
T07749
Symbol
truB
Name
(GenBank) tRNA pseudouridine(55) synthase TruB
KO
K03177
tRNA pseudouridine55 synthase [EC:
5.4.99.25
]
Organism
yia
Yinghuangia sp. ASG 101
Brite
KEGG Orthology (KO) [BR:
yia00001
]
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03016 Transfer RNA biogenesis [BR:
yia03016
]
LO772_23790 (truB)
Enzymes [BR:
yia01000
]
5. Isomerases
5.4 Intramolecular transferases
5.4.99 Transferring other groups
5.4.99.25 tRNA pseudouridine55 synthase
LO772_23790 (truB)
Transfer RNA biogenesis [BR:
yia03016
]
Eukaryotic type
tRNA modification factors
Psudouridine synthases
LO772_23790 (truB)
Prokaryotic type
LO772_23790 (truB)
BRITE hierarchy
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
TruB_N
TruB_C
TruB_C_2
PseudoU_synth_2
DKCLD
Motif
Other DBs
NCBI-ProteinID:
UGQ09900
LinkDB
All DBs
Position
5537685..5538605
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AA seq
306 aa
AA seq
DB search
MSKPRRTGPPPPDGLVVVDKPAGFTSHDVVGRMRRIAGTRRVGHAGTLDPMATGVLVLGI
EKATRLLGHLALTEKTYEATMRLGQATITDDAEGEVTDTVSAAAVTRDAIDAGIAELSGD
IMQVPSKVSAIKVDGKRSYARVRGGEEVELAARPVTVSRFDVHDVRRHPGPDGAPDGLVD
IDATVSCSSGTYIRALARDLGARLGVGGHLTMLRRTAVGPYTLDSARTLEDLAESFSVLP
IADAAAAAFPRRDVTADEARVVSHGGRLGSEGGGPGPIAVFGPDGAFLALVEESRGQAKP
VAVFVG
NT seq
921 nt
NT seq
+upstream
nt +downstream
nt
atgagcaagccccgccgtaccggacccccgccgcccgacggcctcgtcgtcgtcgacaag
cccgcggggttcacctcgcacgacgtggtcggccgcatgcgccgcatcgccgggacgcgg
cgcgtcggccacgcggggacgctcgacccgatggccaccggtgtcctcgtcctcggcatc
gagaaggccacgcggctgctcggccacctcgcactgaccgagaagacctacgaggcgacg
atgcgtctcggccaggcgacgatcaccgacgacgcggaaggcgaggtgacggacacggtg
tccgcggcggccgtcacgcgcgacgcgatcgacgccggaatcgccgagctgagcggcgac
atcatgcaggtgccgtcgaaggtgtcggcgatcaaggtggacggcaagcggtcgtacgcg
cgcgtgcgcggcggcgaggaagtcgagctggccgcccgccccgtgacggtctcgcgcttc
gacgtgcacgacgtgcgccggcaccccggtccggacggcgccccggacgggctggtcgac
atcgacgccaccgtcagttgctcgtccggcacctatatccgcgccctcgcgcgcgacctc
ggcgcccggctcggcgtcggcgggcacctgacgatgctgcgccgcacggccgtcggcccc
tacacactcgactccgcgcgcacgctggaggatctggcggagtcgttctcggtgctcccg
atcgccgacgccgcagccgccgcgttcccgcgccgcgacgtcaccgccgacgaggcgcgc
gtcgtctcgcacggcgggcgcctcggctccgagggaggcggacccggcccgatcgccgtc
ttcggtcccgacggggcgttcctcgccctcgtcgaggagagccgggggcaggcgaagccc
gtcgcggtgttcgtcggctga
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