Yinghuangia sp. ASG 101: LO772_23905
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Entry
LO772_23905 CDS
T07749
Name
(GenBank) HAMP domain-containing protein
Organism
yia
Yinghuangia sp. ASG 101
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
HAMP
HAMP_2
HATPase_c
Response_reg
HisKA
GAF_2
Laminin_II
GAF
Baculo_PEP_C
GAF_3
RNase_Y_N
Motif
Other DBs
NCBI-ProteinID:
UGQ09922
LinkDB
All DBs
Position
5570529..5576333
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AA seq
1934 aa
AA seq
DB search
MANASQRDGRAATAAKGAAKSAAGTGPKASGKGTRRADAPNAGGSTPRGEAAARGGKSRS
SRDEERELRQLLDALTAVRDGNFRRRLTVSGNGIMSEIAAVFNDVVDRNQHLAAELARVR
RVVGREGKLSERFVPGPGEGAWATSFDAANALVDDLVRPTVEVGRVLAAVAEGDLSQRMD
QRIGEQPLRGEFRHMGRTVNGLVDQLSAFADEVTRVAREVGTEGKLGGQAQVRGVTGSWK
DLTESVNTMASRLTLQVRDIALVTTAVARGDLGRKVTVEVAGEMLELKNTVNTMVDQLSG
FASEVTRVAREVGTEGRLGGQARVPGVAGTWKDLTDSVNTMAGNLTAQVRDITQVTTAVA
YGDLSQTIMVSARGEMAQLAETINSMTGTLRTFASEVTRVASEVGFEGRLGVQAQVPGGA
GIWNDLTDSVNTAFFNLTAQVRDIAQVTTAVAQGDLSQKITVDVSGEMLELKNTVNTMVD
QLSAFASEVTRVAREVGSDGILGGQAQVPGVAGTWKDLTDSVNFMAGNLTGQVRNIAEVS
TAVARGDLSQKITVDVSGEMLELKETVNTMVDQLSAFASEVTRVAREVGSDGILGGQARV
VPGVAGVWLDLTDSVNFMAGNLTGQVRNIADVTTAVARGDLSKKIDVDARGEILELKNTV
NTMVDQLSAFASEVTRVAREVGTEGILGGQAQVLGLGGVWRDLTYSVNFMAGNLTGQVRS
IAQVANAVVRGDLSQKITVDARGEILELKTTINTMVEQLSAFAGEVTRVAREVGTEGRLG
GQADVKGVLGTWKDLTESVNVMASNLTGQVRSIAEVTTAVARGDLTQKIMVDARGEILEL
KDTINTMVDQLSAFADEVTRVAREVGTEGILGGQARVRGVSGTWKDLTDNVNSMGNNLTS
QVRNIAQVATAVAGGDLSQKITVDARGEVLELKNTINTMVDTLSWFADEVTRVAREVGTE
GILGGQAHVPGVSGTWKDLTDNVNSMADNLTGQVRSIAEVTTAVADGDLSQKITVDARGE
ILELKTTINTMVDQLSAFAGEVTRVAREVGTDGILGGQAEVEGVSGTWKQLTENVNELAG
NLTRQVRAIAEVATAVTRGDLTLQIDVDARGEILELKDNVNQMIANLGQTTRANQEQDWL
KTNLARISGLMQGRRDLMAVAALIMSELTPVVSAQHGAFFLAEPTVEDRIELRLIASYGY
QNGGAPTRFRLGQSLVGQAALEKRSILVEQAPPGYIKISSGLGESSPVNVVVLPVQFEDQ
LLGVLELASFSAFTQVHRNFLEQLIEQIGVTVNTIMANSRTEMLLAESQRLTEELQERSE
ELQRQQGELRHSNAELEDKAALLARQNRDIEIKTNEIEHAHKVLEERAEQLALSSRYKSE
FLANMSHELRTPLNSLLILAKLLADNVDGNLTRKQVEFSETIHAAGSDLLQLINDILDLS
KVQAGKMDVRPARIAIVQLMDYVEATIRPLTAEKGLDFTVHVSPEVPATLFTDEQRLQQV
LRNLLSNAVKFTDAGSVEVVIRITDDIPVRGGDLEHADQAIAFSVVDTGIGIAEDKLRVI
FEAFQQADGTTSRRYGGTGLGLSISREIAWLLGGEIHAESEPGRGSTFTLYVPLDNVLAE
DDTTPVGAVLARQVGQESAGEANADRPGPRALPPAAPPAAEPRLPEAESVPSRVLAIEEP
QPGGGPIVTTLAGLGDRVEVATAATPAEAAAAIELFVPGCIVVDLRLADDGAWRLLDTLV
DRADLDNVPVLVNMPSRPSRSEAARLRGYRRRIPLLHRVSTPDALAGIVTEATSAVEAQP
KPTVHPFEGTFHGEKVLIVDDDVRNVFALTSVLEQHGLVVTYAENGREGIEKLQSQVDIR
IVLMDIMMPEMDGYATTAAIRRMPQYAGLPIIALTAQAMKGDQAKSIASGMSDYVAKPVD
TSHLLGLIRTWLDQ
NT seq
5805 nt
NT seq
+upstream
nt +downstream
nt
atggcgaacgcttcccagcgggacggacgcgccgcgacggcggcgaagggtgcggcgaag
tccgcggccgggaccgggcccaaggcatcgggcaagggcacccgacgtgccgacgccccg
aatgcgggtggaagcaccccacggggggaggccgcggcgcgtggcgggaagtcccgttcg
agccgggacgaagagcgcgagctgcggcaactcctcgacgcgctcaccgccgtccgcgac
ggcaatttccgccgtcggctcacggtgtccggcaacgggatcatgagcgagatcgccgcg
gtgttcaacgacgtcgtggaccgcaaccagcacctggccgccgagctggcccgcgtgcgc
cgcgtggtgggccgcgaggggaagctgagcgagcgcttcgtccccgggccgggcgagggc
gcgtgggcgacgagcttcgacgcggccaacgccctcgtggacgacctggtgcgcccgacc
gtcgaggtcggccgcgtcctcgccgcggtcgccgagggcgacctgtcccagcgcatggac
cagcggatcggcgagcagccgctgcgcggtgagttccggcacatgggccgcactgtcaac
ggcctggtcgaccaactgtcggcgttcgccgacgaggtgacgcgcgtggcccgcgaggtg
ggcaccgagggcaagctcggcgggcaggcgcaggtccggggcgtgaccgggagctggaag
gacctcaccgagtccgtcaacacgatggcgagccggctgacgctccaggtccgcgacatc
gcgctggtgaccaccgcggtggcgaggggcgatctcgggcgcaaggtgaccgtcgaggtc
gccggcgagatgctggagctcaagaacaccgtcaacacgatggtcgaccagttgtccggc
ttcgcgtcggaggtgacgcgggtcgcccgcgaggtgggcaccgagggccgcctcggcggc
caggcccgggtgcccggggtcgccggcacctggaaggacctcaccgactccgtcaacacc
atggcgggcaacctcaccgcccaggtgcgcgacatcacccaggtgaccaccgcggtggcg
tacggcgacctgtcccagacgatcatggtctcggcgcgcggcgagatggcccagctcgcc
gagacgatcaactcgatgaccgggacgctgcgcacgttcgcgtccgaggtgacgcgggtg
gccagcgaggtcgggttcgagggccggctcggcgtgcaggcgcaggtcccggggggcgcg
ggcatctggaacgacctgaccgactcggtgaacaccgcgttcttcaacctgaccgcgcag
gtgcgtgacatcgcgcaggtcaccaccgcggtcgcgcagggcgatctgtcgcagaagatc
acggtcgacgtgtccggcgagatgctggagctcaagaacaccgtcaacacgatggtcgac
cagttgtcggcgttcgcgtccgaggtgacgcgcgtcgcccgcgaggtcggcagcgacggc
atcctcggcggccaggcccaggtgcccggggtcgccgggacgtggaaggacctcaccgat
tcggtgaacttcatggccggcaacctgaccggccaggtccgcaacatcgccgaagtctcc
accgcggtcgcccgcggtgacctgtcgcagaagatcacggtcgacgtgtccggcgagatg
ctggagctgaaggagaccgtgaacacgatggtcgatcagttgtcggcgttcgcgtcggag
gtgacgcgtgtcgcccgtgaggtcggcagcgacggcatcctcggcgggcaggcgcgcgtc
gtcccgggggtcgccggtgtgtggctcgacctgaccgattcggtgaacttcatggccggc
aacctgaccggccaggtccgcaacatcgccgacgtcaccacggcggtcgcgcgcggcgac
ctgtcgaagaagatcgacgtcgacgcccgcggcgagatcctcgaactcaagaacaccgtg
aacacgatggtcgatcagttgtcggcgttcgcgtccgaggtgacgcgcgtcgcccgcgag
gtgggcaccgagggcatcctcggcgggcaggcgcaggtcctcggcctcggcggcgtatgg
cgcgacctgacctactcggtgaacttcatggccggcaacctcacgggccaggtgcgcagc
atcgcgcaggtcgccaacgccgtcgtacgcggcgacctgtcgcagaagatcaccgtcgac
gcgcgcggcgagatcctcgagctgaagacgacgatcaacacgatggtcgagcagctgtcg
gcgttcgccggcgaggtgacgcgcgtcgcccgcgaggtcggcaccgagggccgtctcggc
ggccaggcggacgtcaagggcgtcctggggacgtggaaggacctcaccgagtccgtcaac
gtcatggcgagcaacctgacgggtcaggtgcgcagcatcgccgaggtgaccacggcggtg
gcccggggcgacctgacgcagaagatcatggtcgacgcgcgcggcgagatcctggagctg
aaggacaccatcaacacgatggtcgaccagctgtcggccttcgcggacgaggtgacgcgg
gtcgcgcgcgaggtcggcaccgagggcatcctcggcggccaggcccgcgtgcgcggcgtg
tccgggacgtggaaggacctgaccgacaacgtcaactcgatgggcaacaacctgacgagc
caggtccgcaacatcgcccaggtcgccaccgcggtcgccggaggcgacctgtcgcagaag
atcaccgtcgacgcgcgcggcgaagtgctcgagctcaagaacaccatcaacacgatggtg
gacaccctcagctggttcgcggacgaggtgacgcgggtcgcgcgcgaggtcggcaccgag
ggcatcctcggcggccaggcgcacgtgccgggcgtgtccgggacgtggaaggacctgacc
gacaacgtcaactcgatggccgacaacctgaccggccaggtgcgcagcatcgccgaggtg
accacggcggtcgccgacggtgacctgtcgcagaagatcaccgtcgacgcgcgcggcgag
attctggagctgaagaccacgatcaacacgatggtcgaccagctctcggcgttcgccggc
gaggtgacgcgcgtcgcgcgcgaggtcgggacggacggcatcctcggcggccaggccgag
gtggagggcgtctcggggacctggaagcagctcaccgagaacgtcaacgagctggcgggc
aacctgacccggcaggtgcgggcgatcgccgaggtcgccaccgcggtgacccgcggcgac
ctgacgctccagatcgacgtcgacgcgcgcggcgagattctggagctcaaggacaacgtc
aaccagatgatcgccaacctgggccagaccacccgggccaaccaggagcaggactggctc
aagaccaacctggcccgcatctccggcctcatgcagggccgccgggacctgatggcggtc
gcggcgctcatcatgagcgagctgaccccggtggtctccgcacagcacggcgcgttcttc
ctcgccgagccgaccgtcgaggaccgcatcgaactgcgcctgatcgccagctacggctac
cagaacggcggcgctcccacgcgcttccggctcggccagtccctcgtcgggcaggcggcg
ctggagaagcgctcgatcctggtcgagcaggcaccgcccggctacatcaagatctcgtcc
gggctcggcgagtcgtcccccgtcaacgtggtcgtgctgcccgtgcagttcgaggaccaa
ctgctcggcgtcctcgaactcgcgtcgttcagcgcgttcacgcaggtgcaccgcaacttc
ctggaacagctcatcgagcagatcggcgtcacggtcaacacgatcatggcgaactcgcgt
accgagatgctgctcgccgagtcgcagcggctcaccgaggagcttcaggagcgttcggag
gaactccagcgccaacagggcgagttgcgccactccaatgcggagctggaggacaaggcg
gcgctgctcgcgcggcagaaccgcgacatcgagatcaagacgaacgagatcgagcacgcc
cacaaggtcctcgaagagcgcgccgaacagctcgcgttgtcgtcgcgctacaagtccgag
ttcctggcgaacatgtcgcacgagctgcgcacgccgctcaacagcctgctgatcctcgcg
aagctgctcgccgacaacgtcgacggcaacctgacccgcaagcaggtcgagttctccgag
acgatccacgcggccggatcggacctgctccagctgatcaacgacatcctggacctgtcg
aaggtgcaggcgggcaagatggacgtccgtcccgcccgcatcgcgatcgtgcagctcatg
gactacgtcgaggcgaccatccggccgctgaccgccgagaagggcctggacttcacggtc
cacgtctcgcccgaggtccccgcgacgctcttcaccgacgagcagcgcctccagcaggtg
ctgcgcaacctcctgtcgaacgccgtcaagttcaccgacgccggctcggtggaggtggtg
atccgcatcacggacgacatcccggtccgcggcggtgatctcgaacacgccgaccaggcg
atcgccttctccgtcgtcgacaccgggatcggtatcgcggaggacaagctccgggtcatc
ttcgaggcgttccagcaggcggacggcaccacgagccgccgctacggcggcaccggcctc
gggttgtcgatcagccgcgagatcgcctggctgctcggcggcgagatccacgccgagagc
gagcccgggcgcggcagcacgttcacgctctacgtgccgctcgacaacgtcctcgccgag
gacgacaccacccccgtgggggccgtgctcgcgcgccaggtcggccaggagagcgcgggg
gaggcgaacgccgaccggcccggtccgcgcgcgctgccgccggccgcgcctccggcggcg
gagccgcggctgcctgaggccgagtcggtgccgagccgggtcctcgccatcgaggagccg
cagccgggaggcgggccgatcgtcaccacgctcgccgggctcggcgaccgggtcgaggtc
gccacggccgcgacaccggccgaggccgccgcggcgatcgagctgttcgtccccgggtgc
atcgtggtcgacctgcgcctggccgacgacggcgcgtggcgcctgctggacaccctggtg
gaccgcgccgacctggacaacgtgccggtgctggtcaacatgccgtcgcgcccgagccgt
tcggaggccgcccgccttcgcggctaccgccgccggatccccctgctgcaccgcgtctcg
acccccgacgcgctcgccgggatagtgacggaggccacatccgcggtggaggcgcagccc
aagccgacggtccacccgttcgaggggactttccacggcgagaaggtgctgatcgtcgac
gacgacgtgcgcaatgtgttcgctctcaccagcgtgctggagcagcacggcctggtcgtc
acatacgccgagaacggccgcgagggcatcgagaagctgcagtcgcaggtcgacatcagg
atcgtcctgatggacatcatgatgccggagatggacggctacgccacgacggcggcgatc
cggcgcatgccgcagtacgcggggctgccgatcatcgcgctcaccgcgcaggcgatgaag
ggcgaccaggccaagagcatcgcgtccggtatgtcagactatgtcgcgaagccggtggac
acctcgcacctgctcgggctgatccgcacgtggttggaccaatga
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