Yinghuangia sp. ASG 101: LO772_26110
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Entry
LO772_26110 CDS
T07749
Name
(GenBank) SigB/SigF/SigG family RNA polymerase sigma factor
KO
K03090
RNA polymerase sigma-B factor
Organism
yia
Yinghuangia sp. ASG 101
Brite
KEGG Orthology (KO) [BR:
yia00001
]
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03021 Transcription machinery [BR:
yia03021
]
LO772_26110
Transcription machinery [BR:
yia03021
]
Prokaryotic type
Bacterial type
RNA polymerase
Sigma factors
LO772_26110
BRITE hierarchy
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Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
Sigma70_r4
Sigma70_r2
Sigma70_r3
Sigma70_r4_2
HTH_3
HTH_37
MarR
HTH_23
HTH_31
HNF-1_N
Trp_repressor
HTH_Crp_2
Motif
Other DBs
NCBI-ProteinID:
UGQ10316
LinkDB
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Position
complement(6091029..6092000)
Genome browser
AA seq
323 aa
AA seq
DB search
MSAPTSIAALSPVPDGKPPAAHPSVHSSLPGWSGPELTREERSLEALSHEEMRRLDKTEI
RRLTEQLLRRMRDVDRESETYGRLRAVVVALNTALVHYVARGFGRRRAPYDDIFQTGTVG
LLKAIDGYDVDRGSEFASFALPTISGEIKRFFRDTSWGVHVTRTLQERFLAVTRAVHQLE
QELSREPTASEIAACLDMDVKDVREARDAGRAYMVDSIDAAPGGNDPSGRNRTPLAELLP
YEEREIALVDFRESVKPLLSALPRREQMILEMRFWQDMPQREIGERLGVSQMHISRLLNG
TLSRLREQLESDGPARRFRKTAA
NT seq
972 nt
NT seq
+upstream
nt +downstream
nt
atgtccgcgcccaccagcattgccgccctgtcccccgtgcccgacggcaagccccccgcc
gcgcatccctccgtacactcctccctgcccggatggtccggtccggaactcacccgcgag
gaacggtcgcttgaggcgctgtcccacgaggagatgcgccgcctcgacaagaccgaaata
cgccggctcaccgagcagttgctgcgccgcatgcgcgacgtcgaccgcgagagcgagacg
tacggcaggctccgcgccgtcgtcgtggccctcaacaccgctctcgtgcactacgtcgcg
cgcggtttcggccgccgccgcgcgccgtacgacgacatcttccagaccgggaccgtcggc
ctgctgaaggccatcgacgggtacgacgtggaccgcggctcggagttcgcgtcattcgcg
ctgcccaccatctccggcgagatcaagcggttcttccgcgacacgtcgtggggtgtgcac
gtcacgcgcaccctccaggagcgcttcctcgccgtcacgcgcgccgtgcaccagctcgaa
caggaactgtcgcgcgagccgaccgcgtccgagatcgccgcgtgcctggacatggatgtc
aaggacgtgcgcgaggcccgcgacgcggggcgcgcgtacatggtcgactcgatcgacgcc
gcgcccgggggcaacgacccctcgggacgcaaccgcacccccttggcggagcttctgccc
tacgaggagcgggagatcgccctcgtcgacttcagggaatcggtgaaaccgctcctcagc
gcgctgcccaggcgcgagcagatgatcttggagatgcgcttttggcaggacatgccgcag
cgggagatcggcgagcgcctcggcgtctcccagatgcacatatcgcggctgttgaacggc
acgttgtcgcggctccgcgagcaattggagtcggacgggccggcccggcggtttcgcaaa
accgcggcataa
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