Yinghuangia sp. ASG 101: LO772_28100
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Entry
LO772_28100 CDS
T07749
Symbol
ruvB
Name
(GenBank) Holliday junction branch migration DNA helicase RuvB
KO
K03551
holliday junction DNA helicase RuvB [EC:
5.6.2.4
]
Organism
yia
Yinghuangia sp. ASG 101
Pathway
yia03440
Homologous recombination
Brite
KEGG Orthology (KO) [BR:
yia00001
]
09120 Genetic Information Processing
09124 Replication and repair
03440 Homologous recombination
LO772_28100 (ruvB)
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03400 DNA repair and recombination proteins [BR:
yia03400
]
LO772_28100 (ruvB)
Enzymes [BR:
yia01000
]
5. Isomerases
5.6 Isomerases altering macromolecular conformation
5.6.2 Enzymes altering nucleic acid conformation
5.6.2.4 DNA 3'-5' helicase
LO772_28100 (ruvB)
DNA repair and recombination proteins [BR:
yia03400
]
Prokaryotic type
DSBR (double strand breaks repair)
HR (homologous recombination)
RecBC pathway proteins
LO772_28100 (ruvB)
RecFOR pathway proteins
LO772_28100 (ruvB)
BRITE hierarchy
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
RuvB_N
AAA_lid_4
RuvB_C
AAA
AAA_5
AAA_16
TIP49
Mg_chelatase
Sigma54_activat
nSTAND3
AAA_14
Sigma54_activ_2
AAA_3
RNA_helicase
Zeta_toxin
DUF815
TsaE
AAA_18
AAA_28
IstB_IS21
NTPase_1
DUF7437
AAA_17
ABC_tran
NPHP3_N
Motif
Other DBs
NCBI-ProteinID:
UGQ10658
LinkDB
All DBs
Position
6541786..6542877
Genome browser
AA seq
363 aa
AA seq
DB search
MTHDGDRLVTAEADGEDQAVEAALRPKSLDEFIGQERVREQLSLVLRAARARGAAPDHVL
LSGPPGLGKTTLSMIIAAEMGAPIRITSGPAIQHAGDLAAILSSLAEGEVLFLDEIHRMS
RPAEEMLYMAMEDFRVDIIVGKGPGATAIPLELPPFTLVGATTRAGLLPPPLRDRFGFTG
HMDFYAPHELERVLHRSARLLDVPIHTDGAAEIAGRSRGTPRIANRLLRRVRDYAQVRAD
GEVTREVAALALDVYEVDAQGLDRLDRAVLHALVTLFGGGPVGLSTLAVAVGEETETVEE
VAEPFLVRSGLLARTPRGRVATAAAWRHLGMAPPQGAASGQSGRSAQQGLFGDEGTAPGG
APV
NT seq
1092 nt
NT seq
+upstream
nt +downstream
nt
atgacgcacgacggggaccgcctggtgaccgccgaggcggacggcgaggaccaggcggtc
gaggccgcactccgacccaagagcctcgacgagttcatcggccaggagcgcgtccgcgag
cagctgtctctggtgctgcgggccgcccgggcgcgcggcgcggcgcccgaccacgtgctg
ctctccggcccgcccgggctcggcaagaccaccttgtcgatgatcatcgccgcggagatg
ggcgcgcccatccgcatcacgtccgggccggccatccagcacgctggcgacctcgccgcg
atcctgtcctcgctcgccgagggcgaggtgctgttcctcgacgagatccaccgcatgtcg
cggcccgccgaagagatgctctacatggcgatggaggacttccgcgtcgacatcatcgtc
ggcaaggggcccggcgcgaccgcgatcccgctcgaactcccgccgttcaccctggtcggc
gcgaccacccgggccggcctgctgcccccgcccctgcgcgaccggttcgggttcaccggc
cacatggacttctacgcgccgcacgagctggagcgcgtgctgcaccggtccgcgcggctg
ctcgacgtcccgatccacaccgacggcgcggccgagatcgccgggcgctcgcgggggaca
ccccggatcgccaaccggctcctgcgccgcgtgcgcgactacgcgcaggtccgggcggac
ggcgaggtcacccgcgaggtcgcggccctcgccctggacgtgtacgaggtcgacgcgcag
ggcctggaccggctcgaccgcgcggtcctgcacgcgctggtgaccctcttcggcggcggt
ccggtcggcctgtcgacgctcgcggtcgccgtcggcgaggagaccgagacggtcgaggag
gtcgccgagccgttcctggtccgcagcggcctgctcgcgcgcacgcccaggggccgggtc
gcgacggcggcggcctggcggcacctggggatggcccctccgcaaggcgccgcgagcgga
cagtcggggcgtagcgcccagcagggattgttcggtgacgaagggaccgcgcccggcggc
gcccccgtgtag
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integrated database retrieval system