KEGG   Yinghuangia sp. ASG 101: LO772_28100
Entry
LO772_28100       CDS       T07749                                 
Symbol
ruvB
Name
(GenBank) Holliday junction branch migration DNA helicase RuvB
  KO
K03551  holliday junction DNA helicase RuvB [EC:5.6.2.4]
Organism
yia  Yinghuangia sp. ASG 101
Pathway
yia03440  Homologous recombination
Brite
KEGG Orthology (KO) [BR:yia00001]
 09120 Genetic Information Processing
  09124 Replication and repair
   03440 Homologous recombination
    LO772_28100 (ruvB)
 09180 Brite Hierarchies
  09182 Protein families: genetic information processing
   03400 DNA repair and recombination proteins [BR:yia03400]
    LO772_28100 (ruvB)
Enzymes [BR:yia01000]
 5. Isomerases
  5.6  Isomerases altering macromolecular conformation
   5.6.2  Enzymes altering nucleic acid conformation
    5.6.2.4  DNA 3'-5' helicase
     LO772_28100 (ruvB)
DNA repair and recombination proteins [BR:yia03400]
 Prokaryotic type
  DSBR (double strand breaks repair)
   HR (homologous recombination)
    RecBC pathway proteins
     LO772_28100 (ruvB)
    RecFOR pathway proteins
     LO772_28100 (ruvB)
SSDB
Motif
Pfam: RuvB_N AAA_lid_4 RuvB_C AAA AAA_5 AAA_16 TIP49 Mg_chelatase Sigma54_activat nSTAND3 AAA_14 Sigma54_activ_2 AAA_3 RNA_helicase Zeta_toxin DUF815 TsaE AAA_18 AAA_28 IstB_IS21 NTPase_1 DUF7437 AAA_17 ABC_tran NPHP3_N
Other DBs
NCBI-ProteinID: UGQ10658
LinkDB
Position
6541786..6542877
AA seq 363 aa
MTHDGDRLVTAEADGEDQAVEAALRPKSLDEFIGQERVREQLSLVLRAARARGAAPDHVL
LSGPPGLGKTTLSMIIAAEMGAPIRITSGPAIQHAGDLAAILSSLAEGEVLFLDEIHRMS
RPAEEMLYMAMEDFRVDIIVGKGPGATAIPLELPPFTLVGATTRAGLLPPPLRDRFGFTG
HMDFYAPHELERVLHRSARLLDVPIHTDGAAEIAGRSRGTPRIANRLLRRVRDYAQVRAD
GEVTREVAALALDVYEVDAQGLDRLDRAVLHALVTLFGGGPVGLSTLAVAVGEETETVEE
VAEPFLVRSGLLARTPRGRVATAAAWRHLGMAPPQGAASGQSGRSAQQGLFGDEGTAPGG
APV
NT seq 1092 nt   +upstreamnt  +downstreamnt
atgacgcacgacggggaccgcctggtgaccgccgaggcggacggcgaggaccaggcggtc
gaggccgcactccgacccaagagcctcgacgagttcatcggccaggagcgcgtccgcgag
cagctgtctctggtgctgcgggccgcccgggcgcgcggcgcggcgcccgaccacgtgctg
ctctccggcccgcccgggctcggcaagaccaccttgtcgatgatcatcgccgcggagatg
ggcgcgcccatccgcatcacgtccgggccggccatccagcacgctggcgacctcgccgcg
atcctgtcctcgctcgccgagggcgaggtgctgttcctcgacgagatccaccgcatgtcg
cggcccgccgaagagatgctctacatggcgatggaggacttccgcgtcgacatcatcgtc
ggcaaggggcccggcgcgaccgcgatcccgctcgaactcccgccgttcaccctggtcggc
gcgaccacccgggccggcctgctgcccccgcccctgcgcgaccggttcgggttcaccggc
cacatggacttctacgcgccgcacgagctggagcgcgtgctgcaccggtccgcgcggctg
ctcgacgtcccgatccacaccgacggcgcggccgagatcgccgggcgctcgcgggggaca
ccccggatcgccaaccggctcctgcgccgcgtgcgcgactacgcgcaggtccgggcggac
ggcgaggtcacccgcgaggtcgcggccctcgccctggacgtgtacgaggtcgacgcgcag
ggcctggaccggctcgaccgcgcggtcctgcacgcgctggtgaccctcttcggcggcggt
ccggtcggcctgtcgacgctcgcggtcgccgtcggcgaggagaccgagacggtcgaggag
gtcgccgagccgttcctggtccgcagcggcctgctcgcgcgcacgcccaggggccgggtc
gcgacggcggcggcctggcggcacctggggatggcccctccgcaaggcgccgcgagcgga
cagtcggggcgtagcgcccagcagggattgttcggtgacgaagggaccgcgcccggcggc
gcccccgtgtag

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