Yinghuangia sp. ASG 101: LO772_28310
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Entry
LO772_28310 CDS
T07749
Symbol
pafA
Name
(GenBank) Pup--protein ligase
KO
K13571
proteasome accessory factor A [EC:
6.3.1.19
]
Organism
yia
Yinghuangia sp. ASG 101
Brite
KEGG Orthology (KO) [BR:
yia00001
]
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03051 Proteasome [BR:
yia03051
]
LO772_28310 (pafA)
Enzymes [BR:
yia01000
]
6. Ligases
6.3 Forming carbon-nitrogen bonds
6.3.1 Acid-D-ammonia (or amine) ligases (amide synthases)
6.3.1.19 prokaryotic ubiquitin-like protein ligase
LO772_28310 (pafA)
Proteasome [BR:
yia03051
]
Prokaryotic proteasome
Bacterial regulatory particles
LO772_28310 (pafA)
BRITE hierarchy
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
Pup_ligase
Ribosomal_L19
Motif
Other DBs
NCBI-ProteinID:
UGQ10695
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Position
6592646..6594007
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AA seq
453 aa
AA seq
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MDRRIFGLENEYGVTCTFRGQRRLSPDEVARYLFRRVVSWGRSSNVFLRNGARLYLDVGS
HPEYATPECDSVPELVVHDKAGERILEGLLVDAERRLHEEGIAGDVYLFKNNTDSAGNSY
GCHENYLVARHGEFSRLADILIPFLVTRQMLCGAGKVLQTPRGAVFCVSQRAEHIWEGVS
SATTRSRPIINTRDEPHADAERYRRLHVIVGDSNMAEPTTMLKVGATDLVLRMIEAGMVM
RDLTLENPIRAIREVSHDMTGQRKVRLANGREASALEIQLEYLTKAMDFADRRGIRTGTV
QQVLDLWERTLTAVQTGNLDLVGREIDWVIKYQLIERYREKHNLPMASPRVAQIDLAYHD
IHRRRGLYYLMERRGQVERVGQDVRIFEAKSVPPQTTRARLRGEFIKKAQEQRRDFTVDW
VHLKLNDQAQRTVLCKDPFRAVDDRVEKLIASM
NT seq
1362 nt
NT seq
+upstream
nt +downstream
nt
atggaccgccgaatcttcgggcttgagaacgagtacggcgtcacctgcacgttccgcggg
cagcgcaggctgtccccggacgaggtggcgcggtatttgtttcgcagagtcgtctcgtgg
ggccgaagcagcaacgtcttcctacgcaatggggccaggctgtatctggacgtgggcagc
caccccgaatacgcaacgccggagtgcgactccgttcccgaactggtcgtgcacgacaaa
gcgggcgagcgcatcctcgagggcctgctcgtggacgccgagcggcgtctgcacgaggag
ggcatcgccggcgacgtctacttgttcaagaacaacaccgactccgcggggaactcgtac
ggctgccacgagaattacctggtggcccggcacggggagttctcgcggctggcggacatc
ctcatcccgttcctggtgacgcgtcagatgctgtgcggcgcgggcaaggtgctgcagacg
ccgcgcggcgcggtgttctgtgtgagccagcgcgccgagcacatctgggagggcgtcagc
tccgcgacgacgcggtcgcggccgataatcaacacgcgtgacgagccgcacgccgatgcg
gagcgctaccggcggctgcacgtgatcgtcggtgactcgaacatggccgagccgacgacg
atgctcaaggtcggggcgaccgatctggtgctgcggatgatcgaggccggcatggtcatg
cgcgatctgaccctggagaacccgatccgggcgatccgcgaggtcagccacgacatgacc
ggtcagcgcaaggtgcgtctggccaacggccgggaggcctccgcgctggagatccagttg
gagtacctgacgaaggcgatggacttcgccgaccgccggggcatccgcaccgggaccgtg
cagcaggtgctggacctgtgggagcgcacgctcaccgcggtgcagaccgggaatctcgac
ctggtcggccgggagatcgactgggtgatcaaataccagttgatcgagcggtaccgggag
aagcacaacctgccgatggcgtcgccgagggtggcgcagatcgatctcgcgtaccacgac
atccaccgccggcgcgggctgtactacctcatggagcggcgcggccaggtcgagcgggtg
ggccaggacgtgcggatcttcgaggcgaagtcggtgcccccgcagaccacccgggcccgg
ctgcgcggcgagttcatcaagaaggcccaggagcagcgccgcgacttcacggtcgactgg
gtgcacctgaagctcaacgaccaggctcagcggaccgtcttgtgcaaggacccgttccgg
gcggtcgacgaccgcgtcgagaagctcatcgcgagcatgtag
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