Yinghuangia sp. ASG 101: LO772_29410
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Entry
LO772_29410 CDS
T07749
Name
(GenBank) type III PLP-dependent enzyme
KO
K01586
diaminopimelate decarboxylase [EC:
4.1.1.20
]
Organism
yia
Yinghuangia sp. ASG 101
Pathway
yia00300
Lysine biosynthesis
yia00470
D-Amino acid metabolism
yia01100
Metabolic pathways
yia01110
Biosynthesis of secondary metabolites
yia01120
Microbial metabolism in diverse environments
yia01230
Biosynthesis of amino acids
Module
yia_M00016
Lysine biosynthesis, succinyl-DAP pathway, aspartate => lysine
Brite
KEGG Orthology (KO) [BR:
yia00001
]
09100 Metabolism
09105 Amino acid metabolism
00300 Lysine biosynthesis
LO772_29410
09106 Metabolism of other amino acids
00470 D-Amino acid metabolism
LO772_29410
Enzymes [BR:
yia01000
]
4. Lyases
4.1 Carbon-carbon lyases
4.1.1 Carboxy-lyases
4.1.1.20 diaminopimelate decarboxylase
LO772_29410
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Motif
Pfam:
Orn_Arg_deC_N
Orn_DAP_Arg_deC
Ala_racemase_N
NCTSP_N
Motif
Other DBs
NCBI-ProteinID:
UGQ15642
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Position
complement(6880381..6881619)
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AA seq
412 aa
AA seq
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MVRAHAHALPDTQLPAYVHDIDGLARHAADVSTASAEGASGAAPRVELYYAAKANPAPEI
LRALAPHVHGIEVASGGELAHVRGAAPGVPIAFGGPGKTDGELDAVVATGVHRLHVESEH
ELRRAAAFARAHGRAVDVLLRANPPVDVPGGPAAVPLAMGGRPSPFGMDPDALDRCARVA
ADEPRLRLLGIHAHLASGLDAAALGLLAEHLLDWAVGWAARNRLDLRELNVGGGMAVDYH
RPEHRFDWRAYGKALAATAARPNAPVLRIEPGRALTAYHGWYVTDILDVKHSRGETFAVV
RGGTHHLRTPAARGHSQPLAVLPRDGWPHPWPRPGVRDEPVTFVGQLCTPKDVLAAHVPV
PGEVRVGDRVAFAMAGAYAWNISHRDFLMHPPPTFHYPTADGTHLEQAGRRT
NT seq
1239 nt
NT seq
+upstream
nt +downstream
nt
gtggtccgggcccacgcgcacgcgctgcccgacacgcaactgcccgcctatgtccacgac
atcgacggcctggcccgccacgcggccgacgtctcgaccgcgtcggcggagggcgcgtcc
ggggccgcaccccgcgtcgagctgtactacgccgccaaggccaacccggcccccgagatc
ctccgcgccctcgccccgcacgtccacggcatcgaggtcgcgtccggcggcgagctggcc
cacgtgcgcggcgccgccccgggggttccgatcgcgttcggcgggccgggcaagaccgac
ggcgagttggacgcggtggtggcaaccggcgtccacaggctgcacgtcgagagcgaacac
gagctgcggcgcgccgccgccttcgcccgcgcccacggccgcgcggtcgacgtcctgctg
cgcgcgaaccccccggtcgacgtgcccggcggaccggccgccgtcccgctggcgatgggc
ggccgaccgagccccttcggcatggaccccgacgcgctcgaccgctgcgcccgcgtggcg
gccgacgaaccccggctgcgcctgctcggcatccacgcgcacctggcgagcgggctcgac
gccgccgctctcgggctcctggccgaacacctgctcgactgggccgtaggctgggccgcc
cgcaaccggctcgacctgcgggaactcaacgtcggcggcggcatggccgtcgactaccac
cgacccgaacacaggttcgattggcgcgcgtacggcaaagccctcgccgcgacggccgcc
cggccgaacgcccccgtgctgcgcatcgagcccggccgcgcgctcaccgcgtaccacggc
tggtatgtgaccgacatcctggacgtcaagcacagccgcggcgagaccttcgccgtcgtc
cgaggcggcacccaccacctgcgcacccccgccgcgcgcggccacagccagccgctcgcc
gtactgccgcgcgacgggtggccgcacccgtggccgaggcccggcgtgcgcgatgaaccg
gtcacgttcgtcgggcagttgtgcacccccaaggacgtcctggccgcgcacgtgccggtg
ccgggcgaggtgcgtgtcggcgaccgcgtcgccttcgcgatggccggggcgtacgcctgg
aacatctcgcaccgggacttcctcatgcacccgccgccgaccttccactacccgaccgcc
gacggaacccatttggagcaggccgggcggcgtacgtag
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