Yimella sp. cx-51: J5M86_01995
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Entry
J5M86_01995 CDS
T07124
Name
(GenBank) DNA polymerase III subunit delta'
KO
K02341
DNA polymerase III subunit delta' [EC:
2.7.7.7
]
Organism
yim
Yimella sp. cx-51
Pathway
yim03030
DNA replication
yim03430
Mismatch repair
yim03440
Homologous recombination
Brite
KEGG Orthology (KO) [BR:
yim00001
]
09120 Genetic Information Processing
09124 Replication and repair
03030 DNA replication
J5M86_01995
03430 Mismatch repair
J5M86_01995
03440 Homologous recombination
J5M86_01995
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03032 DNA replication proteins [BR:
yim03032
]
J5M86_01995
03400 DNA repair and recombination proteins [BR:
yim03400
]
J5M86_01995
Enzymes [BR:
yim01000
]
2. Transferases
2.7 Transferring phosphorus-containing groups
2.7.7 Nucleotidyltransferases
2.7.7.7 DNA-directed DNA polymerase
J5M86_01995
DNA replication proteins [BR:
yim03032
]
Prokaryotic type
DNA Replication Elongation Factors
Elongation factors (bacterial)
DNA polymerase III holoenzyme
J5M86_01995
DNA repair and recombination proteins [BR:
yim03400
]
Prokaryotic type
SSBR (single strand breaks repair)
MMR (mismatch excision repair)
DNA polymerase III holoenzyme
J5M86_01995
BRITE hierarchy
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
DNA_pol3_delta2
AAA
DNApol3-delta_C
AAA_22
nSTAND_NTPase5
Mg_chelatase
AAA_5
RuvB_N
AAA_18
AAA_29
nSTAND3
DUF6587
Motif
Other DBs
NCBI-ProteinID:
QTH39458
LinkDB
All DBs
Position
415160..416308
Genome browser
AA seq
382 aa
AA seq
DB search
MAQRADVWDDVIGQPDVVQTLQRAVTDPAAMTHAWLFTGPPGSGRSTAARAFAAALQCPD
DGCGSCRECRTVLDGSHADLTVLATQGLSIQVKDARELARVAQHSPSVGPWQVILVEDAD
RLTERAADALLKALEEPVERTVWLLCAPSLEDVIITIRSRSRHVRLRTPPVDAVAQLLAR
RDGVPVEQGLLAAQAAQSHVGLAKRLATDAEARARRDSTLVLAASIQHLGDAMRAAEKLD
ALAKQESSAAAGERDAAERERLLQQLGADPGARTQPPHVRSQLASLEKEQKTRATRIGRD
VIDRSLIDLMSVYRDALVVQTGSTVSLINEDHRELVRAIAQRPAEQLLAAMDAIGTARER
IGANVPPLLALEAMMIGLIAAR
NT seq
1149 nt
NT seq
+upstream
nt +downstream
nt
gtggcccagcgggccgacgtgtgggacgacgtcatcggccagcccgatgtcgtgcagacc
ctccagcgagcggtcaccgatcccgccgcgatgacccacgcctggttgttcaccggtccg
cccgggtcgggccgttcgacggccgctcgcgccttcgccgcggcgctgcagtgcccggac
gacggctgcggttcgtgccgcgagtgccgcaccgtgctcgacggctcgcatgccgacctc
acggtgctggcaacgcaggggctgtcgatccaggtgaaggacgcccgcgaactggcccgc
gtcgcacagcactcgccgtcggtcgggccgtggcaggtgatcctcgtcgaggacgccgac
cggctcaccgagcgcgccgccgacgccttgctcaaggcgctggaggagccggtcgagcgc
accgtctggctgttgtgcgcgcccagcctcgaagacgtcatcatcaccatccgtagccgg
tcgcggcatgtgcggctgcgcacaccaccggtcgatgcagtggcgcagttgctcgcccgc
cgcgacggggtgccggtcgagcaagggctgttggctgcgcaggcggcgcagtcacatgtc
ggtctggccaaacggctcgccactgatgccgaggcccgggcccggcgcgacagcacgctg
gtccttgccgcctcgatccagcatctcggcgacgcgatgcgcgccgctgagaaactcgac
gccctcgccaagcaggagtcgagcgcggcagcaggggagcgtgacgccgccgagcgcgag
cgcctgctgcagcaactgggtgccgacccgggcgcacgcacccaaccgccacacgtccgc
tcgcagctggcctccttggagaaggagcagaagacccgcgcgacccgcatcggacgcgat
gtcattgaccgttcactgatcgatctgatgtcggtctaccgcgacgccctggtggtgcag
accggcagcacggtgtcgctcatcaacgaagaccaccgcgaactcgtacgcgcgatcgcc
cagcgtccggccgagcaactgctcgcagccatggacgccatcggcaccgcccgcgagcgc
attggcgccaacgtcccgccactgctggcgctcgaggcgatgatgatcggtctcatcgcg
gcgcgctga
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