Yimella sp. cx-51: J5M86_03505
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Entry
J5M86_03505 CDS
T07124
Symbol
groL
Name
(GenBank) chaperonin GroEL
KO
K04077
chaperonin GroEL [EC:
5.6.1.7
]
Organism
yim
Yimella sp. cx-51
Pathway
yim03018
RNA degradation
Brite
KEGG Orthology (KO) [BR:
yim00001
]
09120 Genetic Information Processing
09123 Folding, sorting and degradation
03018 RNA degradation
J5M86_03505 (groL)
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03019 Messenger RNA biogenesis [BR:
yim03019
]
J5M86_03505 (groL)
03110 Chaperones and folding catalysts [BR:
yim03110
]
J5M86_03505 (groL)
03029 Mitochondrial biogenesis [BR:
yim03029
]
J5M86_03505 (groL)
09183 Protein families: signaling and cellular processes
04147 Exosome [BR:
yim04147
]
J5M86_03505 (groL)
Enzymes [BR:
yim01000
]
5. Isomerases
5.6 Isomerases altering macromolecular conformation
5.6.1 Enzymes altering polypeptide conformation or assembly
5.6.1.7 chaperonin ATPase
J5M86_03505 (groL)
Messenger RNA biogenesis [BR:
yim03019
]
Prokaryotic type
Bacterial mRNA degradation factors
Other RNA degradation factors
Chaperones
J5M86_03505 (groL)
Chaperones and folding catalysts [BR:
yim03110
]
Heat shock proteins
HSP60 / Chaperonin
J5M86_03505 (groL)
Mitochondrial biogenesis [BR:
yim03029
]
Mitochondrial protein import machinery
Matrix
Other matrix factors
J5M86_03505 (groL)
Exosome [BR:
yim04147
]
Exosomal proteins
Exosomal proteins of haemopoietic cells (B-cell, T-cell, DC-cell, reticulocyte, and mast cell)
J5M86_03505 (groL)
Exosomal proteins of other body fluids (saliva and urine)
J5M86_03505 (groL)
Exosomal proteins of breast cancer cells
J5M86_03505 (groL)
Exosomal proteins of colorectal cancer cells
J5M86_03505 (groL)
Exosomal proteins of bladder cancer cells
J5M86_03505 (groL)
BRITE hierarchy
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
Cpn60_TCP1
DUF1192
Motif
Other DBs
NCBI-ProteinID:
QTH38721
LinkDB
All DBs
Position
731662..733272
Genome browser
AA seq
536 aa
AA seq
DB search
MAKTLEFNDDARKSLERGVDALANAVKVTLGPKGRNVVIDKKWGAPTITNDGVTIAREVE
LEDPYENMGAQLAKEVATKTNDIAGDGTTTATVLAQAMVKEGLRNVAAGASPSGVKRGMD
KAVDAVNEQLLANARELEGKEEIAQVASLSAQDSTIGSLIADAFDKVGKDGVITVEESST
AVTELDFTEGMQFDKGYISPYFVTDPERMEAVLEDAYILINQGKISAIADLLPLLEKVVQ
TGKPLLLIAEDIDGEALSTLVVNKIRGTFNVVAVKAPGFGDRRKAMLQDMAILTGGQVIA
EEVGLKLDQVDLDVLGQARRVVVTKDNTTIIDGQGDTADVDGRVKELKAEIERTDSDWDR
EKLQERLAKLAGGVCVIKVGAHTEVELKEKKHRIEDAISATRAAIEEGIVAGGGSALIHA
VSAIDGLNLEGDEATGANVVRKAAAEPLRWIAENAGLEGYVAVAKVGEQPAGSGLNAATG
EYGDLIKAGVIDPVKVTRSALRNAASIASMVLTTDALVVDKPEEEEPAAGGHGHSH
NT seq
1611 nt
NT seq
+upstream
nt +downstream
nt
atggcaaagaccctggaattcaacgacgacgcgcgtaagtcgctcgagcgcggcgtcgac
gcgctcgccaacgccgtcaaggtgacgctcggccccaagggccgcaatgtcgtcatcgac
aagaagtggggcgcccccacgatcaccaacgacggtgtgaccatcgctcgcgaggtcgag
ctggaagacccgtacgagaacatgggtgcgcagctggccaaggaagttgcgaccaagacc
aacgacatcgccggtgacggcaccaccactgcgaccgtgctggcccaggccatggtcaag
gaaggcctgcgcaatgtcgccgccggtgcgtccccctcgggtgtgaagcgcggcatggac
aaagccgtggacgccgtcaacgagcagctgctggccaacgcccgcgagctggagggcaag
gaagagatcgcgcaggtggcgtccctctcggcccaggactccaccatcggcagcctcatc
gccgacgcgttcgacaaggtcggcaaggacggtgtcatcaccgtcgaggagtcgtcgacc
gcggtcaccgagctcgacttcaccgagggcatgcagttcgacaagggctacatctcgccc
tacttcgtcaccgaccccgagcgcatggaggccgtcctggaggacgcctacatcctcatc
aaccagggcaagatctcggccatcgccgacctgctgccgctgctggagaaggtcgtgcag
accggtaagccgctgctgctcatcgctgaggacatcgacggcgaagccctctcgacgctg
gtcgtcaacaagatccgtggcaccttcaacgtcgtggccgtgaaggctcctggcttcggc
gaccgccgcaaggcgatgctgcaggacatggccatcctgaccggcggtcaggtcatcgcc
gaagaggtcggactcaagctcgaccaggtcgacctcgacgtgctgggccaggcccgccgc
gtggtggtgaccaaggacaacaccacgatcatcgacggtcagggtgacaccgcggatgtc
gacggtcgcgtcaaggagctcaaggccgagatcgagcgcaccgactccgattgggaccgc
gagaagctgcaggagcgcctcgccaagctcgccggtggcgtctgcgtcatcaaggtcggc
gcccacaccgaggtggagctgaaggagaagaagcaccgcatcgaggacgccatctccgcc
acccgcgccgccatcgaggaaggcatcgtggccggtggtggatcggctctgatccacgcc
gtgtcggccatcgacggcctcaacctcgaaggtgacgaggccaccggtgccaacgtcgtg
cgcaaggcagccgccgagccgctgcgttggatcgccgagaacgccggtctcgagggttac
gtcgcggttgccaaggtgggcgagcagcccgcgggcagcggtctgaacgccgccaccggc
gagtacggcgacctcatcaaggccggcgtcatcgacccggtcaaggtcacccgctcggcg
ctgcgaaacgccgcgtccatcgcctcgatggtgctcaccaccgacgcgctggtcgtcgac
aagccggaggaagaagagccggctgcgggcggtcacggccactcgcactga
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