Yimella sp. cx-51: J5M86_04850
Help
Entry
J5M86_04850 CDS
T07124
Name
(GenBank) D-alanine--D-alanine ligase
KO
K01921
D-alanine-D-alanine ligase [EC:
6.3.2.4
]
Organism
yim
Yimella sp. cx-51
Pathway
yim00470
D-Amino acid metabolism
yim00550
Peptidoglycan biosynthesis
yim01100
Metabolic pathways
yim01502
Vancomycin resistance
Brite
KEGG Orthology (KO) [BR:
yim00001
]
09100 Metabolism
09106 Metabolism of other amino acids
00470 D-Amino acid metabolism
J5M86_04850
09107 Glycan biosynthesis and metabolism
00550 Peptidoglycan biosynthesis
J5M86_04850
09160 Human Diseases
09175 Drug resistance: antimicrobial
01502 Vancomycin resistance
J5M86_04850
09180 Brite Hierarchies
09181 Protein families: metabolism
01011 Peptidoglycan biosynthesis and degradation proteins [BR:
yim01011
]
J5M86_04850
Enzymes [BR:
yim01000
]
6. Ligases
6.3 Forming carbon-nitrogen bonds
6.3.2 Acid-D-amino-acid ligases (peptide synthases)
6.3.2.4 D-alanine---D-alanine ligase
J5M86_04850
Peptidoglycan biosynthesis and degradation proteins [BR:
yim01011
]
Precursor biosynthesis
Amino acid ligase
J5M86_04850
BRITE hierarchy
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
Dala_Dala_lig_C
Dala_Dala_lig_N
ATP-grasp
CPSase_L_D2
ATP-grasp_4
Chal_sti_synt_C
Motif
Other DBs
NCBI-ProteinID:
QTH38961
LinkDB
All DBs
Position
1024741..1025901
Genome browser
AA seq
386 aa
AA seq
DB search
MTTQPPSPDTSTVDLGASRDRKPVVALVFGGRSAEHVVSCATAASVLRSIDRERYDVLPI
GITETGRWVLMADDPEPLQLTATHKPAVSGDNEVLVSPDPAGHSLSLREPGQVPRELGEV
DVVFPLLHGPFGEDGTIQGLLELSDMRYVGSGVSASAVMMDKHLMKVVFRSAGLPVGPYV
LITDKEWQRDPAASMDPVAALGWPVFVKPARAGSSVGVTRVESADQLKDAIEHARQFDPK
VLVEAAIVGREVECGILEGRGSDPARASQVGEIAVTEGTHAFYDFESKYLDDSARLICPA
DLPEDIAETIREQSIKAFDAAGCEGLARVDWFYSPDGTLTLNEINTMPGFTPTSMYPRVW
DAQGVSYRELITELIELALQRRLGLR
NT seq
1161 nt
NT seq
+upstream
nt +downstream
nt
atgactacgcagcctccctccccggacacctccaccgtcgacctcggcgcgtcccgcgac
cgcaaaccggtcgtcgcgctcgtcttcggtggtcgctcggccgaacacgtggtctcgtgc
gccaccgccgccagtgtgctgcgctccatcgaccgtgagcggtacgacgtgttgccgatc
ggcatcaccgagaccggtcgttgggtgttgatggctgatgatccagaacccttgcagctc
accgcaacccacaagcctgcggtgtcgggcgacaatgaggtgctggtcagccctgacccg
gccgggcacagcctgtcgctgcgtgagcccggacaggtgccgcgcgaactcggcgaggtc
gacgtcgtcttccccctgctgcacggcccgttcggtgaggacggaaccatccagggactc
ctggaactatccgacatgcggtatgtcgggtccggtgtgtcggcgtcggcggtgatgatg
gacaaacacctcatgaaagtggtcttccgctccgccggactgcccgtcggcccgtatgtg
ctcatcaccgacaaggagtggcagcgtgatccggccgccagcatggacccggtcgccgcg
ctcggatggccggttttcgtcaagccggcgcgggccggaagcagcgtcggggtgactcgg
gtcgaatctgccgatcaactcaaggacgccatcgagcatgctcggcagttcgaccccaag
gtgctggtcgaggccgccatcgtgggccgtgaagtggaatgtggaatcctcgaaggccgg
ggtagtgacccggcacgggcatcccaggtcggtgagatcgcggtgaccgagggcacgcac
gccttctacgacttcgagtcgaagtacctggacgactccgctcgcctcatctgtcccgca
gacctacccgaagacatcgccgagacgatccgtgagcaatcgatcaaggccttcgacgcg
gcaggctgtgagggcctggcgcgggtcgactggttctactcacccgatggcactctcacg
ctgaacgagatcaacaccatgcccggtttcacgccgacctcgatgtaccccagggtctgg
gacgcgcagggcgtgagctatcgggagttgatcaccgaactgatcgaactcgccctgcag
cgacgcctcggtctgcgctga
DBGET
integrated database retrieval system
