Yimella sp. cx-51: J5M86_05280
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Entry
J5M86_05280 CDS
T07124
Name
(GenBank) spermidine/putrescine ABC transporter substrate-binding protein
KO
K11069
spermidine/putrescine transport system substrate-binding protein
Organism
yim
Yimella sp. cx-51
Pathway
yim02010
ABC transporters
Brite
KEGG Orthology (KO) [BR:
yim00001
]
09130 Environmental Information Processing
09131 Membrane transport
02010 ABC transporters
J5M86_05280
09180 Brite Hierarchies
09183 Protein families: signaling and cellular processes
02000 Transporters [BR:
yim02000
]
J5M86_05280
Transporters [BR:
yim02000
]
ABC transporters, prokaryotic type
Mineral and organic ion transporters
Spermidine/putrescine transporter
J5M86_05280
BRITE hierarchy
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
SBP_bac_8
SBP_bac_6
SBP_bac_1
SBP_bac_11
RDV-p3
Motif
Other DBs
NCBI-ProteinID:
QTH39039
LinkDB
All DBs
Position
1114780..1116012
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AA seq
410 aa
AA seq
DB search
MTRRRPPEDPMVRDLIRMSRQGLSRRALLGASGAGALAALTAACAPPKPPAAAGVAQVQL
PQDLSDTEKIVNWANWTAYLDYDEKTKSNPTLDAFSKKTGIKASYFEDIDDNDTYVNKVS
PQLRAKQNINRDLMVLTDWMAVRVIRDALVQPIDLITMANVHRLRPSLQNVSFDPGRTRS
ITWQSGFAGIAYDKSKVKPMKAIEDLWRPELKGKVTVLSEFRDTAGLIMQSQGVDISKDF
TKAQVEKAFDEVSKRVSDGNIRRIKGNSYLEDMKAGNAIAGIVWSGDVFMLKAETENDNW
EFVIPDSGGTLWSDNLMIPITARHRRNAQKLIDYYYDPKVAAEVAAYVNYVSPVIGAEAE
MEKIDPDLAKSPFIFPSEQYIKEKKIQGFRALDAQEDAEYSAMWAKVVGN
NT seq
1233 nt
NT seq
+upstream
nt +downstream
nt
atgactcgtcgtcgaccgccagaggacccgatggtccgtgacctgattcggatgagcagg
cagggcctgtcgcggcgtgcgctgctgggtgcctcgggcgccggtgcgctcgcggcgctc
actgccgcgtgtgcgccgccgaagccgcctgctgccgcgggggtcgcacaggtgcagttg
ccccaggacctctccgacaccgagaagatcgtcaactgggccaactggaccgcttatctc
gactacgacgagaagacgaagtcgaatcccacgctggacgccttctccaagaagacgggg
atcaaggcttcatacttcgaggacatcgacgacaacgacacctatgtcaacaaggtgtcg
ccgcagttgcgagcgaagcagaacatcaaccgtgacctgatggtgctgaccgactggatg
gcggtgcgcgtcatccgcgatgcgctggtgcagccgatcgacctcatcacgatggcgaat
gtgcaccgcctgcgcccttcgttgcagaacgtgtcctttgacccgggccgcacacggtcg
atcacgtggcagtcgggtttcgccggcatcgcctacgacaagtcgaaggtcaagccgatg
aaggcgatcgaggacctctggcgtccggagctcaagggcaaggtcaccgtgttgtcggag
ttccgtgacacggcgggtctgatcatgcagagccaaggtgtcgacatttccaaggatttc
accaaggcccaggtggagaaggccttcgacgaggtgagcaagcgggtcagcgacggcaac
atccgtcgcatcaagggcaactcctacctggaggacatgaaggctggtaacgcgatcgcc
ggaatcgtctggagcggtgacgtcttcatgctgaaggccgagaccgagaacgacaactgg
gagttcgtgatccccgactccggcggcacgctgtggagcgacaacctgatgatcccgatc
accgcccgccaccgccgtaatgcgcagaagctgatcgactactactacgaccccaaggtc
gcggcggaagtggcggcgtacgtcaattacgtgtcgccggtgatcggtgcggaggctgag
atggagaagatcgatcccgacctcgccaagagcccgttcatcttcccgagcgagcagtac
atcaaggagaagaagatccagggcttccgtgcgctggatgcacaggaggacgcggagtac
agcgccatgtgggcaaaggtggtgggcaactga
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