Yimella sp. cx-51: J5M86_05485
Help
Entry
J5M86_05485 CDS
T07124
Symbol
truB
Name
(GenBank) tRNA pseudouridine(55) synthase TruB
KO
K03177
tRNA pseudouridine55 synthase [EC:
5.4.99.25
]
Organism
yim
Yimella sp. cx-51
Brite
KEGG Orthology (KO) [BR:
yim00001
]
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03016 Transfer RNA biogenesis [BR:
yim03016
]
J5M86_05485 (truB)
Enzymes [BR:
yim01000
]
5. Isomerases
5.4 Intramolecular transferases
5.4.99 Transferring other groups
5.4.99.25 tRNA pseudouridine55 synthase
J5M86_05485 (truB)
Transfer RNA biogenesis [BR:
yim03016
]
Eukaryotic type
tRNA modification factors
Psudouridine synthases
J5M86_05485 (truB)
Prokaryotic type
J5M86_05485 (truB)
BRITE hierarchy
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
TruB_N
TruB_C_2
TruB_C
PseudoU_synth_2
DKCLD
Motif
Other DBs
NCBI-ProteinID:
QTH39076
LinkDB
All DBs
Position
1160048..1160959
Genome browser
AA seq
303 aa
AA seq
DB search
MTPDGLLLVDKPSGWTSHDVVARTRRLAGTRRVGHAGTLDPMATGLLVLGVNRATKLLTF
LVGCDKTYTATVRLGQSTVTDDAEGDVTTSAPAHELTTDAVAAAITRLTGEIQQVPSSVS
AIKVDGHRAYAKVRGGDEVKLKARPITVHSFDLMSSTPRPDVGKGVLDLEVEVDVSSGTY
VRALARDLGAALGVGGHLTALRRTRVGRFDLSGVPTMEALNAAHESGAPLEVIPMARAAR
DQFPVRELSEADARTLRYGQRLPAGGPNSSVVAAAAGDDLVAMLDQSGERPKSLVVFPAS
FAQ
NT seq
912 nt
NT seq
+upstream
nt +downstream
nt
gtgacgcccgacgggctactgctggtcgacaagccctccggctggaccagtcatgacgtg
gtggcccgcacccgccggttggccggcacccgacgtgttggccacgccggcaccctcgac
ccgatggccaccgggttactcgtgctcggcgtcaaccgcgccacgaaactcctcaccttc
ctggtgggatgcgacaagacctacaccgccaccgtccggctgggacaaagcaccgtcacc
gatgacgccgagggcgatgtcacgacctccgctccggcacacgagctcacgaccgacgcc
gtggccgccgcgatcacccggctgacgggagagatacagcaggtgccgagttccgtgagc
gcgatcaaggtcgacggacaccgggcgtacgcgaaggttcgcgggggtgatgaggtgaag
ttgaaggcgcgcccgatcaccgtgcactccttcgacctcatgtcgagcacgccacgaccg
gacgtcggtaagggcgtgcttgaccttgaagttgaagtcgacgtctcgtcgggcacgtac
gtccgcgcacttgcccgcgatctcggtgcagctctcggagttggcggccatctgaccgcg
cttcgccgcacccgagtggggcgcttcgacctgagcggtgtgccgaccatggaagcgctg
aacgcagcccacgaaagtggcgcaccgctggaggtgatcccgatggcgcgtgctgcccgc
gatcagttccctgtgcgcgaactctccgaggcggacgctcgcacgctgcgctacgggcaa
cgcctcccggcaggtggtccgaactcctccgtggtcgccgcggccgccggcgacgacctc
gtcgcgatgctcgaccagagcggtgagcgccccaagtcgctggtcgtcttccctgcgtcc
ttcgcccagtga
DBGET
integrated database retrieval system
