Yimella sp. cx-51: J5M86_06580
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Entry
J5M86_06580 CDS
T07124
Symbol
carB
Name
(GenBank) carbamoyl-phosphate synthase large subunit
KO
K01955
carbamoyl-phosphate synthase large subunit [EC:
6.3.5.5
]
Organism
yim
Yimella sp. cx-51
Pathway
yim00220
Arginine biosynthesis
yim00240
Pyrimidine metabolism
yim00250
Alanine, aspartate and glutamate metabolism
yim01100
Metabolic pathways
yim01110
Biosynthesis of secondary metabolites
yim01240
Biosynthesis of cofactors
Brite
KEGG Orthology (KO) [BR:
yim00001
]
09100 Metabolism
09104 Nucleotide metabolism
00240 Pyrimidine metabolism
J5M86_06580 (carB)
09105 Amino acid metabolism
00250 Alanine, aspartate and glutamate metabolism
J5M86_06580 (carB)
00220 Arginine biosynthesis
J5M86_06580 (carB)
Enzymes [BR:
yim01000
]
6. Ligases
6.3 Forming carbon-nitrogen bonds
6.3.5 Carbon-nitrogen ligases with glutamine as amido-N-donor
6.3.5.5 carbamoyl-phosphate synthase (glutamine-hydrolysing)
J5M86_06580 (carB)
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Gene cluster
GFIT
Motif
Pfam:
CPSase_L_D2
CPSase_L_D3
MGS
Dala_Dala_lig_C
ATP-grasp
ATPgrasp_Ter
ATP-grasp_5
ATP-grasp_3
ATP-grasp_4
CoA_binding_2
DUF6003
MoeA_N
DUF2795
Motif
Other DBs
NCBI-ProteinID:
QTH39260
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Position
1388006..1391338
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AA seq
1110 aa
AA seq
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MPKREDIKSVLVIGSGPIVIGQACEFDYSGTQACRVLQEEGIRVVLVNSNPATIMTDPEF
ADATYVEPITPDVIEEIIAKERPDAVLATLGGQTALNAAIALHERGTLEKYNCPLIGANV
EAIELGEDRERFKGVVERCGAESAKSQICHTMDECLAAANELGYPVVVRPSFTMGGLGSG
FAYDEADLRRIAGAGLQYSPTTEVLLEESILGWKEYELEVMRDHADNVVVVCSIENLDPM
GVHTGDSITVAPALTLTDREYQRLRDIGIAVIREVGVDTGGCNIQFAVNPENGRIIVIEM
NPRVSRSSALASKATGFPIAKIAAKMAIGYTLDEVPNDITQETPASFEPTLDYVVVKVPR
FAFEKFPAADPTLTTTMKSVGEAMSIGRNFTEALQKALRSMERKESTFHWQRDIAPTLEA
GRALLEQAKTPTDGRIVLVQQALRAGLSVEEVHEATGIDPWFLDQIELINEVALVVQDAD
QLTPELLRLAKRHGFSDAQIAQLRQMPESVIRGVRHALGVRPVFKTVDTCAAEFAARTPY
HYSSYDQENEVAPRERPAVIILGSGPNRIGQGVEFDYSCVHASFALRDAGFDTVMVNCNP
ETVSTDYDTSSRLYFEPLTLEDVLEVYHVEKQAGPIAGVIVQLGGQTPLGLAKALKAEGV
PIVGTSPEAIDLAEDRGAFGRVLDEAKLPAPKHGIAYSAAEAVRVARDIGYPVLVRPSYV
LGGRGMEIVYDDDTLSEYVERATNASPEHPVLVDRFLDDAIEIDVDALYDGKDIYLGGIM
EHIEEAGIHSGDSACTLPPVTLGAEEIERVRESTRKLAEGVGVRGLMNIQFALAQDILYV
LEANPRASRTVPFVAKATGVPLAKAAARVMLGASIQQLRDEGMLPAQGDGSTLPDTAPIS
VKEAVLPFKRFRTKEGDVVDSLLGPEMRSTGEVMGIDRDLGSAFAKSQLGSVTGLPNQGT
VFVSVANRDKRAMIFPAKRLVDLGFTLMATSGTAAVLRRNGIEATVVRKHSLGRGPDGEP
TIVDRILAGEVDMVVNSPSGSGARADGYAIRAATTSMDKPIITTVQQFGAAVQGIEAQQT
GEIRVKPLQDHARDLNLYGRVSDGAGHQSS
NT seq
3333 nt
NT seq
+upstream
nt +downstream
nt
gtgccgaagcgcgaagacatcaaatccgtcctggtgattgggtcgggtccgattgtgatc
ggtcaggcctgcgagttcgactactcgggtacgcaggcctgccgggtgctgcaggaggag
ggcattcgcgtcgtcctggtcaactccaacccggccacgatcatgaccgaccctgagttc
gctgacgccacctatgtcgagccgatcacccccgacgtgatcgaggagatcatcgccaag
gagcgtccggacgcggtgctggcgaccctcggtggacagaccgcactgaatgcagccatc
gcgctgcacgagcgcggcacgctggagaagtacaactgcccgctgatcggcgcgaatgtc
gaggcgatcgaactcggtgaggaccgcgagcggttcaagggtgtcgtcgagcgttgtggt
gcggagtcggcgaagtcgcagatctgccacaccatggacgaatgcctcgctgccgcaaac
gaactcggctatccggtggtcgtgcgtccgtcgttcacgatgggcgggcttggctcgggt
ttcgcctacgacgaggccgatctgcggcgtatcgccggggccggcctgcagtacagcccg
accaccgaggtgctcctggaggagtcgatcctcggatggaaggagtacgagctggaggtg
atgcgcgaccacgccgacaacgttgtggtggtctgctccatcgagaacctcgacccgatg
ggcgtgcacaccggagattccatcaccgtcgccccggccctgaccctcaccgaccgtgag
taccagcggctgcgtgacatcggtatcgccgtgatccgcgaggtcggtgtcgacaccggt
ggctgcaacatccagttcgcggtcaacccggagaacggccggatcatcgtcatcgagatg
aacccccgcgtctcccgctcgtcggcgcttgcctccaaggccaccggcttcccgatcgcc
aagatcgccgcgaagatggccatcggttacaccctggacgaggtgccgaacgacatcacc
caggagacgcccgccagcttcgagccgacgctcgactacgtcgtggtgaaggtgccgcgt
ttcgccttcgagaagttcccggcggccgaccccacgctgaccacgacgatgaagtcggtg
ggcgaggccatgtcgatcggacgcaacttcaccgaggcgctgcagaaggcgctgcggtcg
atggaacgcaaggaatcgaccttccactggcagcgcgacatcgcgcccaccctcgaggcc
ggccgggcgttgctggagcaggcgaagacacccaccgatggacgaatcgtgctggtgcag
caggctcttcgcgccggactctccgtggaagaggtgcacgaggcaaccggcatcgacccg
tggttcctcgaccagatcgagctgatcaacgaggtagcgctggtggtgcaggacgccgac
cagctcaccccggagttgctgcgtctggccaagcgtcacggcttctccgacgcccagatc
gcgcaactgcgccagatgcccgaatcggtcatccgcggtgtgcgccacgcgctcggcgtc
cgacctgtgttcaagacggtcgacacctgcgcggccgagttcgcggctcgcacgccgtac
cactactccagctacgaccaggagaacgaggtcgccccgcgtgagcggccggcggtcatc
atcctggggtcggggcccaaccgcatcgggcagggcgtggagttcgactactcgtgtgtg
cacgcgtccttcgcgctgcgcgacgccggcttcgacaccgtcatggtcaactgcaacccc
gagactgtctcgaccgactacgacacctccagcaggctctacttcgaaccgctgaccctg
gaggacgtgctcgaggtctaccacgtggagaagcaggctggtccgatcgccggggtgatc
gtgcagctgggcggtcagaccccgttggggctggccaaggcgttgaaggccgagggtgtg
ccgatcgtgggtacttcgcccgaggccatcgacctcgccgaggaccgcggtgctttcgga
cgcgtgctggacgaggccaagctgcccgcccccaagcacggcatcgcctacagcgccgcc
gaggcagtgcgcgtggctcgtgacatcggctacccggtgctggtgcgtccctcctatgtg
ctcggcggccgcggcatggagatcgtctacgacgacgacacgctgtcggagtacgtcgag
cgcgcgaccaatgcctcaccggagcacccggtgctggtcgaccggttcctggacgacgcg
atcgagatcgacgtcgacgccctctacgacggcaaggacatctacctcggcggaatcatg
gagcacatcgaggaagcaggcatccactccggcgactcggcgtgcaccttgccgccggtg
accctcggcgccgaggagatcgagcgtgtgcgggaatcgactcgaaagcttgccgaaggt
gtcggcgtccgcggtctgatgaacatccagttcgcgctcgcccaggacatcctctacgtg
ctggaggccaatccgcgggcgagccgcactgtgcccttcgtggccaaggccaccggcgtg
ccgctggccaaggccgccgcgcgggtcatgctcggcgccagtatccagcagttgcgggac
gagggcatgctgcccgcacagggcgacggatcgaccctgcccgacaccgcgccgatctcg
gtgaaggaggcggtgctgccgttcaagcggttccgcaccaaggagggcgacgtcgtcgac
agcctgctggggcccgagatgcgctcgaccggtgaggtcatgggtatcgaccgcgacctc
ggatcggccttcgccaaatcgcagctcggttcggtgaccggtctgccgaaccagggcacg
gtcttcgtctcggtggccaaccgcgacaagcgcgcgatgatcttcccggccaagcgcctg
gtcgacctgggcttcacactcatggcgacgtccggtacggcggctgtgttgcgccgcaac
ggaatcgaagcgactgtcgtgcgcaagcacagcctcggtcgcgggcccgacggtgagccc
accatcgtcgaccgcatcctggccggcgaggtcgacatggtcgtcaacagcccctccggg
agcggcgcccgcgctgacggatacgcgattcgtgcggccaccaccagcatggacaagccg
atcatcaccaccgtgcagcagttcggtgcggcggtgcagggcatcgaagcgcagcagacc
ggtgagatccgggtgaagccgttgcaggaccacgcccgcgatctcaacctctacgggcga
gtgagcgacggtgctggtcaccagtcgagctga
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